Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp3P28862 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Mmp3P28862 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.85■□□□□ 0.93
Mmp3P28862 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp3P28862 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp3P28862 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp3P28862 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp3P28862 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp3P28862 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp3P28862 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp3P28862 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp3P28862 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Mmp3P28862 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp3P28862 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp3P28862 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp3P28862 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp3P28862 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp3P28862 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Mmp3P28862 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Mmp3P28862 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp3P28862 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.83■□□□□ 0.93
Mmp3P28862 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp3P28862 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.83■□□□□ 0.93
Mmp3P28862 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp3P28862 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp3P28862 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Mmp3P28862 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp3P28862 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp3P28862 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp3P28862 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.82■□□□□ 0.92
Mmp3P28862 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Mmp3P28862 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp3P28862 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp3P28862 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp3P28862 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp3P28862 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp3P28862 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp3P28862 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp3P28862 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp3P28862 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp3P28862 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp3P28862 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Mmp3P28862 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Mmp3P28862 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.81■□□□□ 0.92
Mmp3P28862 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.81■□□□□ 0.92
Mmp3P28862 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp3P28862 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp3P28862 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Mmp3P28862 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp3P28862 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Mmp3P28862 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.8■□□□□ 0.92
Mmp3P28862 Gm13534-201ENSMUST00000121169 513 ntBASIC20.8■□□□□ 0.92
Mmp3P28862 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.8■□□□□ 0.92
Mmp3P28862 Gm27011-201ENSMUST00000182352 972 ntBASIC20.8■□□□□ 0.92
Mmp3P28862 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.8■□□□□ 0.92
Mmp3P28862 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp3P28862 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp3P28862 Gm7860-201ENSMUST00000121190 879 ntBASIC20.79■□□□□ 0.92
Mmp3P28862 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp3P28862 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp3P28862 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp3P28862 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.78■□□□□ 0.92
Mmp3P28862 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp3P28862 Mir5133-201ENSMUST00000174955 77 ntBASIC20.78■□□□□ 0.92
Mmp3P28862 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.78■□□□□ 0.92
Mmp3P28862 Gm6420-201ENSMUST00000193885 723 ntBASIC20.78■□□□□ 0.92
Mmp3P28862 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp3P28862 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp3P28862 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Mmp3P28862 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp3P28862 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp3P28862 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp3P28862 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp3P28862 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp3P28862 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp3P28862 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp3P28862 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.77■□□□□ 0.92
Mmp3P28862 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Mmp3P28862 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Mmp3P28862 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp3P28862 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Mmp3P28862 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.76■□□□□ 0.91
Mmp3P28862 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.76■□□□□ 0.91
Mmp3P28862 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp3P28862 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Mmp3P28862 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp3P28862 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp3P28862 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.76■□□□□ 0.91
Mmp3P28862 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp3P28862 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp3P28862 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp3P28862 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp3P28862 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.75■□□□□ 0.91
Mmp3P28862 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp3P28862 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp3P28862 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Mmp3P28862 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp3P28862 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.75■□□□□ 0.91
Mmp3P28862 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Mmp3P28862 Nespas-201ENSMUST00000143738 1083 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms