Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cntn1P12960 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cntn1P12960 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cntn1P12960 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cntn1P12960 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cntn1P12960 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cntn1P12960 Gm18671-201ENSMUST00000214826 683 ntBASIC18.59■□□□□ 0.57
Cntn1P12960 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cntn1P12960 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cntn1P12960 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cntn1P12960 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cntn1P12960 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.59■□□□□ 0.57
Cntn1P12960 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cntn1P12960 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cntn1P12960 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
Cntn1P12960 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cntn1P12960 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cntn1P12960 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cntn1P12960 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cntn1P12960 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cntn1P12960 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.58■□□□□ 0.56
Cntn1P12960 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.58■□□□□ 0.56
Cntn1P12960 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cntn1P12960 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cntn1P12960 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cntn1P12960 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cntn1P12960 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cntn1P12960 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cntn1P12960 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.57■□□□□ 0.56
Cntn1P12960 Gm10033-202ENSMUST00000211874 928 ntBASIC18.57■□□□□ 0.56
Cntn1P12960 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.57■□□□□ 0.56
Cntn1P12960 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cntn1P12960 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cntn1P12960 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cntn1P12960 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cntn1P12960 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cntn1P12960 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cntn1P12960 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cntn1P12960 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cntn1P12960 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.56■□□□□ 0.56
Cntn1P12960 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cntn1P12960 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Cntn1P12960 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cntn1P12960 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cntn1P12960 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cntn1P12960 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cntn1P12960 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cntn1P12960 Gm10849-201ENSMUST00000100397 618 ntBASIC18.55■□□□□ 0.56
Cntn1P12960 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.55■□□□□ 0.56
Cntn1P12960 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cntn1P12960 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cntn1P12960 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cntn1P12960 Reep4-203ENSMUST00000226563 1444 ntBASIC18.55■□□□□ 0.56
Cntn1P12960 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.55■□□□□ 0.56
Cntn1P12960 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cntn1P12960 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cntn1P12960 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cntn1P12960 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cntn1P12960 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cntn1P12960 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cntn1P12960 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cntn1P12960 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cntn1P12960 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cntn1P12960 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.54■□□□□ 0.56
Cntn1P12960 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.54■□□□□ 0.56
Cntn1P12960 Gm7291-201ENSMUST00000199147 382 ntBASIC18.54■□□□□ 0.56
Cntn1P12960 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cntn1P12960 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.54■□□□□ 0.56
Cntn1P12960 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cntn1P12960 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cntn1P12960 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cntn1P12960 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cntn1P12960 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cntn1P12960 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cntn1P12960 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cntn1P12960 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cntn1P12960 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cntn1P12960 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cntn1P12960 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cntn1P12960 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cntn1P12960 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cntn1P12960 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cntn1P12960 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.52■□□□□ 0.56
Cntn1P12960 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cntn1P12960 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cntn1P12960 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cntn1P12960 Gm27405-201ENSMUST00000184201 112 ntBASIC18.52■□□□□ 0.56
Cntn1P12960 AV356131-201ENSMUST00000206201 750 ntBASIC18.52■□□□□ 0.56
Cntn1P12960 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.52■□□□□ 0.56
Cntn1P12960 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cntn1P12960 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cntn1P12960 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Cntn1P12960 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Cntn1P12960 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.55
Cntn1P12960 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Cntn1P12960 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cntn1P12960 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cntn1P12960 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cntn1P12960 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.51■□□□□ 0.55
Cntn1P12960 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms