Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
PdgfrbP05622 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PdgfrbP05622 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PdgfrbP05622 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.58■□□□□ 0.72
PdgfrbP05622 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
PdgfrbP05622 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PdgfrbP05622 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PdgfrbP05622 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PdgfrbP05622 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PdgfrbP05622 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PdgfrbP05622 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.57■□□□□ 0.72
PdgfrbP05622 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PdgfrbP05622 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PdgfrbP05622 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PdgfrbP05622 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PdgfrbP05622 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PdgfrbP05622 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfrbP05622 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PdgfrbP05622 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfrbP05622 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfrbP05622 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.56■□□□□ 0.72
PdgfrbP05622 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfrbP05622 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfrbP05622 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfrbP05622 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfrbP05622 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfrbP05622 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfrbP05622 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.55■□□□□ 0.72
PdgfrbP05622 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfrbP05622 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PdgfrbP05622 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PdgfrbP05622 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PdgfrbP05622 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PdgfrbP05622 Smad6-203ENSMUST00000179458 273 ntBASIC19.54■□□□□ 0.72
PdgfrbP05622 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PdgfrbP05622 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PdgfrbP05622 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PdgfrbP05622 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PdgfrbP05622 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
PdgfrbP05622 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.53■□□□□ 0.72
PdgfrbP05622 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PdgfrbP05622 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.53■□□□□ 0.72
PdgfrbP05622 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PdgfrbP05622 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PdgfrbP05622 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PdgfrbP05622 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PdgfrbP05622 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PdgfrbP05622 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PdgfrbP05622 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PdgfrbP05622 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PdgfrbP05622 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.52■□□□□ 0.72
PdgfrbP05622 Gm43017-201ENSMUST00000198296 752 ntBASIC19.52■□□□□ 0.72
PdgfrbP05622 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PdgfrbP05622 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PdgfrbP05622 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PdgfrbP05622 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PdgfrbP05622 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PdgfrbP05622 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PdgfrbP05622 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PdgfrbP05622 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PdgfrbP05622 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PdgfrbP05622 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PdgfrbP05622 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PdgfrbP05622 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PdgfrbP05622 Iqck-206ENSMUST00000208658 2891 ntBASIC19.5■□□□□ 0.71
PdgfrbP05622 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.5■□□□□ 0.71
PdgfrbP05622 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PdgfrbP05622 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PdgfrbP05622 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PdgfrbP05622 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PdgfrbP05622 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
PdgfrbP05622 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PdgfrbP05622 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfrbP05622 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfrbP05622 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfrbP05622 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfrbP05622 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfrbP05622 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfrbP05622 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfrbP05622 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfrbP05622 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfrbP05622 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PdgfrbP05622 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfrbP05622 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfrbP05622 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfrbP05622 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.47■□□□□ 0.71
PdgfrbP05622 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfrbP05622 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PdgfrbP05622 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.47■□□□□ 0.71
PdgfrbP05622 Gm11421-201ENSMUST00000122124 294 ntBASIC19.47■□□□□ 0.71
PdgfrbP05622 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PdgfrbP05622 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfrbP05622 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfrbP05622 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfrbP05622 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfrbP05622 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
PdgfrbP05622 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PdgfrbP05622 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PdgfrbP05622 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.46■□□□□ 0.71
PdgfrbP05622 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms