Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.95■□□□□ 0.3
P04224 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P04224 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04224 Rarb-207ENSMUST00000225921 2756 ntBASIC16.94■□□□□ 0.3
P04224 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04224 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04224 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04224 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04224 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04224 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04224 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04224 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04224 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04224 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P04224 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04224 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P04224 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04224 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04224 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04224 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04224 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P04224 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04224 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
P04224 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04224 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
P04224 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P04224 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04224 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.92■□□□□ 0.3
P04224 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04224 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
P04224 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.92■□□□□ 0.3
P04224 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
P04224 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
P04224 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04224 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04224 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04224 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
P04224 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
P04224 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.92■□□□□ 0.3
P04224 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04224 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04224 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P04224 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P04224 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
P04224 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P04224 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P04224 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
P04224 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
P04224 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P04224 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
P04224 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
P04224 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
P04224 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P04224 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
P04224 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P04224 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P04224 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
P04224 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04224 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
P04224 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
P04224 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04224 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04224 Golph3-205ENSMUST00000228671 2842 ntBASIC16.9■□□□□ 0.3
P04224 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.9■□□□□ 0.3
P04224 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
P04224 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.9■□□□□ 0.3
P04224 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
P04224 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.9■□□□□ 0.3
P04224 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.9■□□□□ 0.3
P04224 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04224 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04224 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
P04224 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.9■□□□□ 0.3
P04224 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04224 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04224 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
P04224 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
P04224 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04224 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P04224 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
P04224 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
P04224 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04224 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04224 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04224 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.89■□□□□ 0.29
P04224 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04224 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04224 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04224 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04224 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04224 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.89■□□□□ 0.29
P04224 Gm45444-201ENSMUST00000211394 898 ntBASIC16.89■□□□□ 0.29
P04224 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04224 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04224 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.89■□□□□ 0.29
P04224 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04224 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
P04224 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04224 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04224 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms