Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CfdP03953 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CfdP03953 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CfdP03953 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CfdP03953 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CfdP03953 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CfdP03953 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CfdP03953 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CfdP03953 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CfdP03953 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CfdP03953 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CfdP03953 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CfdP03953 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CfdP03953 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CfdP03953 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CfdP03953 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CfdP03953 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CfdP03953 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CfdP03953 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CfdP03953 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CfdP03953 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.19■□□□□ 0.18
CfdP03953 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CfdP03953 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CfdP03953 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CfdP03953 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CfdP03953 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CfdP03953 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CfdP03953 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.18■□□□□ 0.18
CfdP03953 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CfdP03953 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CfdP03953 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CfdP03953 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CfdP03953 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.18■□□□□ 0.18
CfdP03953 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.18■□□□□ 0.18
CfdP03953 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.18■□□□□ 0.18
CfdP03953 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CfdP03953 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CfdP03953 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.18■□□□□ 0.18
CfdP03953 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CfdP03953 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.18■□□□□ 0.18
CfdP03953 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.18■□□□□ 0.18
CfdP03953 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.18■□□□□ 0.18
CfdP03953 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CfdP03953 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CfdP03953 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CfdP03953 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CfdP03953 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CfdP03953 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CfdP03953 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.17■□□□□ 0.18
CfdP03953 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.17■□□□□ 0.18
CfdP03953 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CfdP03953 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CfdP03953 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CfdP03953 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CfdP03953 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.16■□□□□ 0.18
CfdP03953 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CfdP03953 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.16■□□□□ 0.18
CfdP03953 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.16■□□□□ 0.18
CfdP03953 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.16■□□□□ 0.18
CfdP03953 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CfdP03953 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CfdP03953 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CfdP03953 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CfdP03953 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CfdP03953 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CfdP03953 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CfdP03953 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CfdP03953 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CfdP03953 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CfdP03953 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.15■□□□□ 0.18
CfdP03953 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CfdP03953 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
CfdP03953 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CfdP03953 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.15■□□□□ 0.18
CfdP03953 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CfdP03953 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CfdP03953 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.15■□□□□ 0.18
CfdP03953 Gm45444-201ENSMUST00000211394 898 ntBASIC16.15■□□□□ 0.18
CfdP03953 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CfdP03953 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.15■□□□□ 0.18
CfdP03953 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CfdP03953 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.15■□□□□ 0.18
CfdP03953 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CfdP03953 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CfdP03953 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms