Protein–RNA interactions for Protein: P00397

Mtco1, Cytochrome c oxidase subunit 1, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtco1P00397 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mtco1P00397 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mtco1P00397 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Mtco1P00397 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Mtco1P00397 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Mtco1P00397 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mtco1P00397 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Mtco1P00397 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Mtco1P00397 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Mtco1P00397 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mtco1P00397 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Mtco1P00397 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Mtco1P00397 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.25■□□□□ 0.99
Mtco1P00397 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Mtco1P00397 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.25■□□□□ 0.99
Mtco1P00397 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mtco1P00397 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Mtco1P00397 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Mtco1P00397 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mtco1P00397 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Mtco1P00397 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Mtco1P00397 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Mtco1P00397 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mtco1P00397 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mtco1P00397 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.23■□□□□ 0.99
Mtco1P00397 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Mtco1P00397 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mtco1P00397 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mtco1P00397 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mtco1P00397 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mtco1P00397 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mtco1P00397 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mtco1P00397 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.22■□□□□ 0.99
Mtco1P00397 Mir5133-201ENSMUST00000174955 77 ntBASIC21.22■□□□□ 0.99
Mtco1P00397 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.22■□□□□ 0.99
Mtco1P00397 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Mtco1P00397 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.22■□□□□ 0.99
Mtco1P00397 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mtco1P00397 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Mtco1P00397 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.22■□□□□ 0.99
Mtco1P00397 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Mtco1P00397 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mtco1P00397 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mtco1P00397 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.21■□□□□ 0.99
Mtco1P00397 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.21■□□□□ 0.99
Mtco1P00397 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.21■□□□□ 0.99
Mtco1P00397 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Mtco1P00397 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Mtco1P00397 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mtco1P00397 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mtco1P00397 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Mtco1P00397 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.21■□□□□ 0.99
Mtco1P00397 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Mtco1P00397 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Mtco1P00397 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mtco1P00397 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mtco1P00397 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mtco1P00397 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mtco1P00397 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.2■□□□□ 0.98
Mtco1P00397 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.2■□□□□ 0.98
Mtco1P00397 Gm6420-201ENSMUST00000193885 723 ntBASIC21.2■□□□□ 0.98
Mtco1P00397 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mtco1P00397 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mtco1P00397 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mtco1P00397 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mtco1P00397 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mtco1P00397 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mtco1P00397 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Mtco1P00397 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Mtco1P00397 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mtco1P00397 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.19■□□□□ 0.98
Mtco1P00397 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mtco1P00397 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Mtco1P00397 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Mtco1P00397 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mtco1P00397 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mtco1P00397 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Mtco1P00397 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Mtco1P00397 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Mtco1P00397 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mtco1P00397 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Mtco1P00397 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mtco1P00397 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mtco1P00397 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.18■□□□□ 0.98
Mtco1P00397 Nespas-201ENSMUST00000143738 1083 ntBASIC21.18■□□□□ 0.98
Mtco1P00397 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Mtco1P00397 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.18■□□□□ 0.98
Mtco1P00397 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mtco1P00397 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mtco1P00397 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Mtco1P00397 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mtco1P00397 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Mtco1P00397 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mtco1P00397 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Mtco1P00397 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mtco1P00397 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mtco1P00397 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mtco1P00397 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mtco1P00397 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mtco1P00397 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms