Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DhfrP00375 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DhfrP00375 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
DhfrP00375 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DhfrP00375 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DhfrP00375 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DhfrP00375 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.39■□□□□ 0.37
DhfrP00375 Gm22238-201ENSMUST00000175222 88 ntBASIC17.39■□□□□ 0.37
DhfrP00375 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DhfrP00375 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.39■□□□□ 0.37
DhfrP00375 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.39■□□□□ 0.37
DhfrP00375 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DhfrP00375 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DhfrP00375 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DhfrP00375 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DhfrP00375 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DhfrP00375 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DhfrP00375 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DhfrP00375 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.38■□□□□ 0.37
DhfrP00375 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
DhfrP00375 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DhfrP00375 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DhfrP00375 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DhfrP00375 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
DhfrP00375 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
DhfrP00375 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
DhfrP00375 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
DhfrP00375 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DhfrP00375 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DhfrP00375 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DhfrP00375 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DhfrP00375 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.37■□□□□ 0.37
DhfrP00375 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
DhfrP00375 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DhfrP00375 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
DhfrP00375 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
DhfrP00375 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DhfrP00375 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DhfrP00375 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.37■□□□□ 0.37
DhfrP00375 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
DhfrP00375 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
DhfrP00375 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DhfrP00375 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DhfrP00375 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DhfrP00375 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DhfrP00375 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DhfrP00375 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
DhfrP00375 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DhfrP00375 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DhfrP00375 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DhfrP00375 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DhfrP00375 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.36■□□□□ 0.37
DhfrP00375 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
DhfrP00375 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DhfrP00375 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DhfrP00375 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DhfrP00375 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DhfrP00375 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
DhfrP00375 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
DhfrP00375 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.35■□□□□ 0.37
DhfrP00375 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DhfrP00375 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
DhfrP00375 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.35■□□□□ 0.37
DhfrP00375 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DhfrP00375 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
DhfrP00375 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DhfrP00375 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DhfrP00375 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
DhfrP00375 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DhfrP00375 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.34■□□□□ 0.37
DhfrP00375 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DhfrP00375 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.34■□□□□ 0.37
DhfrP00375 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.34■□□□□ 0.37
DhfrP00375 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
DhfrP00375 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.34■□□□□ 0.37
DhfrP00375 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DhfrP00375 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DhfrP00375 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DhfrP00375 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DhfrP00375 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DhfrP00375 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
DhfrP00375 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
DhfrP00375 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DhfrP00375 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.33■□□□□ 0.37
DhfrP00375 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.33■□□□□ 0.36
DhfrP00375 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
DhfrP00375 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DhfrP00375 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DhfrP00375 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DhfrP00375 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DhfrP00375 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DhfrP00375 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DhfrP00375 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DhfrP00375 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
DhfrP00375 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.32■□□□□ 0.36
DhfrP00375 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.32■□□□□ 0.36
DhfrP00375 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DhfrP00375 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
DhfrP00375 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DhfrP00375 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms