Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
Vti1aO89116 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vti1aO89116 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.88■□□□□ 0.93
Vti1aO89116 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vti1aO89116 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Vti1aO89116 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.88■□□□□ 0.93
Vti1aO89116 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vti1aO89116 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.87■□□□□ 0.93
Vti1aO89116 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.87■□□□□ 0.93
Vti1aO89116 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.87■□□□□ 0.93
Vti1aO89116 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.87■□□□□ 0.93
Vti1aO89116 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vti1aO89116 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vti1aO89116 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vti1aO89116 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vti1aO89116 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vti1aO89116 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vti1aO89116 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vti1aO89116 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Vti1aO89116 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.86■□□□□ 0.93
Vti1aO89116 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.86■□□□□ 0.93
Vti1aO89116 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.86■□□□□ 0.93
Vti1aO89116 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Vti1aO89116 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
Vti1aO89116 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Vti1aO89116 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vti1aO89116 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vti1aO89116 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Vti1aO89116 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.85■□□□□ 0.93
Vti1aO89116 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vti1aO89116 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vti1aO89116 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Vti1aO89116 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.85■□□□□ 0.93
Vti1aO89116 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Vti1aO89116 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.85■□□□□ 0.93
Vti1aO89116 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.85■□□□□ 0.93
Vti1aO89116 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vti1aO89116 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vti1aO89116 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vti1aO89116 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vti1aO89116 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vti1aO89116 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vti1aO89116 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vti1aO89116 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vti1aO89116 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vti1aO89116 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vti1aO89116 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vti1aO89116 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Vti1aO89116 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vti1aO89116 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vti1aO89116 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Vti1aO89116 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.83■□□□□ 0.93
Vti1aO89116 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Vti1aO89116 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.83■□□□□ 0.93
Vti1aO89116 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.83■□□□□ 0.93
Vti1aO89116 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vti1aO89116 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Vti1aO89116 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vti1aO89116 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Vti1aO89116 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vti1aO89116 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vti1aO89116 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vti1aO89116 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vti1aO89116 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vti1aO89116 Gm13234-201ENSMUST00000120010 747 ntBASIC20.82■□□□□ 0.92
Vti1aO89116 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vti1aO89116 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.82■□□□□ 0.92
Vti1aO89116 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vti1aO89116 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vti1aO89116 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.82■□□□□ 0.92
Vti1aO89116 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vti1aO89116 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vti1aO89116 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vti1aO89116 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Vti1aO89116 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vti1aO89116 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vti1aO89116 Reep4-203ENSMUST00000226563 1444 ntBASIC20.81■□□□□ 0.92
Vti1aO89116 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vti1aO89116 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Vti1aO89116 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.81■□□□□ 0.92
Vti1aO89116 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vti1aO89116 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vti1aO89116 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vti1aO89116 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vti1aO89116 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vti1aO89116 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Vti1aO89116 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Vti1aO89116 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vti1aO89116 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Vti1aO89116 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.8■□□□□ 0.92
Vti1aO89116 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Vti1aO89116 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vti1aO89116 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.8■□□□□ 0.92
Vti1aO89116 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vti1aO89116 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Vti1aO89116 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Vti1aO89116 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Vti1aO89116 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vti1aO89116 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Vti1aO89116 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms