Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CopeO89079 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.97■□□□□ 0.79
CopeO89079 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CopeO89079 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CopeO89079 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CopeO89079 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CopeO89079 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CopeO89079 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CopeO89079 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CopeO89079 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CopeO89079 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CopeO89079 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CopeO89079 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CopeO89079 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CopeO89079 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CopeO89079 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CopeO89079 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CopeO89079 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.95■□□□□ 0.78
CopeO89079 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CopeO89079 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CopeO89079 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CopeO89079 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CopeO89079 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CopeO89079 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CopeO89079 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CopeO89079 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CopeO89079 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CopeO89079 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CopeO89079 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CopeO89079 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CopeO89079 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CopeO89079 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CopeO89079 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CopeO89079 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.94■□□□□ 0.78
CopeO89079 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CopeO89079 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.94■□□□□ 0.78
CopeO89079 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CopeO89079 Gm7417-201ENSMUST00000192950 473 ntBASIC19.94■□□□□ 0.78
CopeO89079 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CopeO89079 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CopeO89079 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CopeO89079 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CopeO89079 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CopeO89079 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.93■□□□□ 0.78
CopeO89079 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CopeO89079 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CopeO89079 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CopeO89079 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.93■□□□□ 0.78
CopeO89079 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CopeO89079 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CopeO89079 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CopeO89079 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CopeO89079 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.92■□□□□ 0.78
CopeO89079 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CopeO89079 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.92■□□□□ 0.78
CopeO89079 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CopeO89079 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CopeO89079 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.92■□□□□ 0.78
CopeO89079 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CopeO89079 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CopeO89079 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CopeO89079 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CopeO89079 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.92■□□□□ 0.78
CopeO89079 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.91■□□□□ 0.78
CopeO89079 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.91■□□□□ 0.78
CopeO89079 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.91■□□□□ 0.78
CopeO89079 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CopeO89079 Gm15820-201ENSMUST00000201566 728 ntBASIC19.91■□□□□ 0.78
CopeO89079 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CopeO89079 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CopeO89079 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CopeO89079 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CopeO89079 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CopeO89079 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CopeO89079 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CopeO89079 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CopeO89079 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.9■□□□□ 0.78
CopeO89079 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CopeO89079 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CopeO89079 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.9■□□□□ 0.78
CopeO89079 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CopeO89079 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CopeO89079 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CopeO89079 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopeO89079 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
CopeO89079 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopeO89079 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopeO89079 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopeO89079 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CopeO89079 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
CopeO89079 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopeO89079 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopeO89079 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopeO89079 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopeO89079 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopeO89079 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopeO89079 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CopeO89079 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CopeO89079 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CopeO89079 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms