Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Syn1O88935 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syn1O88935 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Syn1O88935 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syn1O88935 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syn1O88935 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syn1O88935 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syn1O88935 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syn1O88935 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.02■□□□□ 0.8
Syn1O88935 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
Syn1O88935 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Syn1O88935 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Syn1O88935 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syn1O88935 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syn1O88935 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syn1O88935 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.01■□□□□ 0.79
Syn1O88935 Gm26524-201ENSMUST00000192339 390 ntBASIC20.01■□□□□ 0.79
Syn1O88935 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.01■□□□□ 0.79
Syn1O88935 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syn1O88935 Rab3c-203ENSMUST00000224180 967 ntBASIC20.01■□□□□ 0.79
Syn1O88935 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Syn1O88935 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.01■□□□□ 0.79
Syn1O88935 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syn1O88935 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syn1O88935 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syn1O88935 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syn1O88935 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Syn1O88935 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Syn1O88935 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20■□□□□ 0.79
Syn1O88935 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Syn1O88935 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Syn1O88935 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Syn1O88935 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Syn1O88935 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syn1O88935 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syn1O88935 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syn1O88935 Gm5643-201ENSMUST00000117081 966 ntBASIC19.99■□□□□ 0.79
Syn1O88935 Gm12896-201ENSMUST00000118430 226 ntBASIC19.99■□□□□ 0.79
Syn1O88935 Gm11643-201ENSMUST00000119578 864 ntBASIC19.99■□□□□ 0.79
Syn1O88935 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syn1O88935 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Syn1O88935 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Syn1O88935 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syn1O88935 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Syn1O88935 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.99■□□□□ 0.79
Syn1O88935 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syn1O88935 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syn1O88935 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syn1O88935 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syn1O88935 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Syn1O88935 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Syn1O88935 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syn1O88935 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syn1O88935 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syn1O88935 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syn1O88935 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syn1O88935 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Syn1O88935 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syn1O88935 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Syn1O88935 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Syn1O88935 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Syn1O88935 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syn1O88935 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.97■□□□□ 0.79
Syn1O88935 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syn1O88935 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syn1O88935 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.96■□□□□ 0.79
Syn1O88935 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Syn1O88935 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Syn1O88935 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Syn1O88935 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Syn1O88935 Gm13534-201ENSMUST00000121169 513 ntBASIC19.96■□□□□ 0.79
Syn1O88935 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Syn1O88935 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Syn1O88935 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Syn1O88935 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Syn1O88935 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Syn1O88935 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Syn1O88935 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Syn1O88935 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Syn1O88935 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Syn1O88935 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Syn1O88935 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.95■□□□□ 0.78
Syn1O88935 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.95■□□□□ 0.78
Syn1O88935 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Syn1O88935 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.95■□□□□ 0.78
Syn1O88935 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Syn1O88935 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Syn1O88935 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.95■□□□□ 0.78
Syn1O88935 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Syn1O88935 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Syn1O88935 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Syn1O88935 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syn1O88935 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syn1O88935 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Syn1O88935 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syn1O88935 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.94■□□□□ 0.78
Syn1O88935 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syn1O88935 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syn1O88935 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Syn1O88935 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms