Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn1O88551 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.56■□□□□ 0.24
Cldn1O88551 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn1O88551 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn1O88551 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn1O88551 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cldn1O88551 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn1O88551 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn1O88551 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cldn1O88551 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn1O88551 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn1O88551 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn1O88551 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn1O88551 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.54■□□□□ 0.24
Cldn1O88551 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cldn1O88551 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.54■□□□□ 0.24
Cldn1O88551 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Cldn1O88551 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn1O88551 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn1O88551 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cldn1O88551 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn1O88551 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Cldn1O88551 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn1O88551 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn1O88551 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Cldn1O88551 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn1O88551 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn1O88551 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn1O88551 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn1O88551 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn1O88551 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cldn1O88551 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.52■□□□□ 0.24
Cldn1O88551 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Cldn1O88551 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.52■□□□□ 0.24
Cldn1O88551 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.52■□□□□ 0.24
Cldn1O88551 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn1O88551 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn1O88551 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn1O88551 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Cldn1O88551 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn1O88551 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn1O88551 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn1O88551 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.51■□□□□ 0.23
Cldn1O88551 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn1O88551 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cldn1O88551 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn1O88551 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn1O88551 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cldn1O88551 Gm13148-201ENSMUST00000118892 745 ntBASIC16.51■□□□□ 0.23
Cldn1O88551 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn1O88551 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.51■□□□□ 0.23
Cldn1O88551 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn1O88551 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn1O88551 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn1O88551 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn1O88551 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn1O88551 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.51■□□□□ 0.23
Cldn1O88551 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn1O88551 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn1O88551 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn1O88551 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn1O88551 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.5■□□□□ 0.23
Cldn1O88551 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cldn1O88551 Gm13168-201ENSMUST00000121771 632 ntBASIC16.5■□□□□ 0.23
Cldn1O88551 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn1O88551 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cldn1O88551 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn1O88551 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.5■□□□□ 0.23
Cldn1O88551 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.5■□□□□ 0.23
Cldn1O88551 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn1O88551 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn1O88551 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn1O88551 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cldn1O88551 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.5■□□□□ 0.23
Cldn1O88551 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn1O88551 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn1O88551 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn1O88551 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn1O88551 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn1O88551 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cldn1O88551 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cldn1O88551 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.49■□□□□ 0.23
Cldn1O88551 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn1O88551 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.49■□□□□ 0.23
Cldn1O88551 Gm5408-201ENSMUST00000197998 747 ntBASIC16.49■□□□□ 0.23
Cldn1O88551 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn1O88551 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.49■□□□□ 0.23
Cldn1O88551 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn1O88551 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn1O88551 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn1O88551 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn1O88551 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn1O88551 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn1O88551 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn1O88551 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn1O88551 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.48■□□□□ 0.23
Cldn1O88551 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn1O88551 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn1O88551 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.48■□□□□ 0.23
Cldn1O88551 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms