Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.82■□□□□ 0.44
Cops4O88544 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cops4O88544 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cops4O88544 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cops4O88544 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Cops4O88544 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cops4O88544 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cops4O88544 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.82■□□□□ 0.44
Cops4O88544 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cops4O88544 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.82■□□□□ 0.44
Cops4O88544 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Cops4O88544 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops4O88544 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.81■□□□□ 0.44
Cops4O88544 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops4O88544 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops4O88544 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cops4O88544 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops4O88544 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cops4O88544 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cops4O88544 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cops4O88544 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cops4O88544 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cops4O88544 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cops4O88544 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cops4O88544 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.8■□□□□ 0.44
Cops4O88544 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops4O88544 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops4O88544 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops4O88544 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Cops4O88544 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops4O88544 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.8■□□□□ 0.44
Cops4O88544 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.8■□□□□ 0.44
Cops4O88544 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.8■□□□□ 0.44
Cops4O88544 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.8■□□□□ 0.44
Cops4O88544 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cops4O88544 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops4O88544 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cops4O88544 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cops4O88544 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cops4O88544 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops4O88544 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops4O88544 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops4O88544 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops4O88544 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cops4O88544 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cops4O88544 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.79■□□□□ 0.44
Cops4O88544 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.79■□□□□ 0.44
Cops4O88544 Gm40881-201ENSMUST00000223397 166 ntBASIC17.79■□□□□ 0.44
Cops4O88544 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops4O88544 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops4O88544 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops4O88544 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops4O88544 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops4O88544 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops4O88544 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Cops4O88544 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cops4O88544 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.78■□□□□ 0.44
Cops4O88544 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.78■□□□□ 0.44
Cops4O88544 Gm15820-201ENSMUST00000201566 728 ntBASIC17.78■□□□□ 0.44
Cops4O88544 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops4O88544 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops4O88544 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.78■□□□□ 0.44
Cops4O88544 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops4O88544 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops4O88544 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops4O88544 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops4O88544 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops4O88544 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cops4O88544 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cops4O88544 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cops4O88544 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cops4O88544 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cops4O88544 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cops4O88544 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cops4O88544 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cops4O88544 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cops4O88544 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.77■□□□□ 0.44
Cops4O88544 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.77■□□□□ 0.44
Cops4O88544 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cops4O88544 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cops4O88544 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops4O88544 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.76■□□□□ 0.43
Cops4O88544 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.76■□□□□ 0.43
Cops4O88544 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops4O88544 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cops4O88544 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.76■□□□□ 0.43
Cops4O88544 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cops4O88544 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Cops4O88544 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.76■□□□□ 0.43
Cops4O88544 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops4O88544 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.76■□□□□ 0.43
Cops4O88544 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops4O88544 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cops4O88544 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops4O88544 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cops4O88544 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops4O88544 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops4O88544 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.75■□□□□ 0.43
Cops4O88544 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.75■□□□□ 0.43
Cops4O88544 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms