Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh16O88338 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh16O88338 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cdh16O88338 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh16O88338 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh16O88338 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh16O88338 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cdh16O88338 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Cdh16O88338 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh16O88338 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh16O88338 BC021767-201ENSMUST00000126387 1716 ntBASIC18.92■□□□□ 0.62
Cdh16O88338 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh16O88338 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cdh16O88338 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh16O88338 Gm10232-201ENSMUST00000089221 720 ntBASIC18.92■□□□□ 0.62
Cdh16O88338 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh16O88338 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh16O88338 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh16O88338 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh16O88338 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.92■□□□□ 0.62
Cdh16O88338 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh16O88338 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh16O88338 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh16O88338 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.92■□□□□ 0.62
Cdh16O88338 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Cdh16O88338 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.91■□□□□ 0.62
Cdh16O88338 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cdh16O88338 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.91■□□□□ 0.62
Cdh16O88338 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Gm10399-202ENSMUST00000202768 748 ntBASIC18.91■□□□□ 0.62
Cdh16O88338 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Cdh16O88338 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cdh16O88338 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.91■□□□□ 0.62
Cdh16O88338 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh16O88338 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh16O88338 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Cdh16O88338 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh16O88338 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cdh16O88338 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh16O88338 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.9■□□□□ 0.62
Cdh16O88338 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh16O88338 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh16O88338 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh16O88338 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cdh16O88338 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdh16O88338 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdh16O88338 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh16O88338 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cdh16O88338 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.89■□□□□ 0.61
Cdh16O88338 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdh16O88338 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cdh16O88338 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdh16O88338 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh16O88338 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh16O88338 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh16O88338 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh16O88338 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.88■□□□□ 0.61
Cdh16O88338 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh16O88338 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh16O88338 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.88■□□□□ 0.61
Cdh16O88338 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh16O88338 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh16O88338 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.87■□□□□ 0.61
Cdh16O88338 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cdh16O88338 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh16O88338 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.87■□□□□ 0.61
Cdh16O88338 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh16O88338 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh16O88338 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.87■□□□□ 0.61
Cdh16O88338 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh16O88338 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh16O88338 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.86■□□□□ 0.61
Cdh16O88338 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdh16O88338 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh16O88338 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.86■□□□□ 0.61
Cdh16O88338 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cdh16O88338 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Cdh16O88338 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.86■□□□□ 0.61
Cdh16O88338 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh16O88338 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh16O88338 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh16O88338 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh16O88338 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms