Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ubr1O70481 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ubr1O70481 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ubr1O70481 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ubr1O70481 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ubr1O70481 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC25.56■■□□□ 1.68
Ubr1O70481 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ubr1O70481 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC25.56■■□□□ 1.68
Ubr1O70481 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ubr1O70481 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ubr1O70481 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC25.56■■□□□ 1.68
Ubr1O70481 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ubr1O70481 Gm6802-201ENSMUST00000167843 1983 ntBASIC25.55■■□□□ 1.68
Ubr1O70481 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC25.55■■□□□ 1.68
Ubr1O70481 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC25.55■■□□□ 1.68
Ubr1O70481 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ubr1O70481 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ubr1O70481 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC25.55■■□□□ 1.68
Ubr1O70481 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ubr1O70481 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ubr1O70481 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ubr1O70481 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ubr1O70481 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC25.54■■□□□ 1.68
Ubr1O70481 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Ubr1O70481 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC25.54■■□□□ 1.68
Ubr1O70481 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ubr1O70481 AC131586.2-201ENSMUST00000228370 1512 ntBASIC25.54■■□□□ 1.68
Ubr1O70481 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC25.54■■□□□ 1.68
Ubr1O70481 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
Ubr1O70481 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ubr1O70481 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ubr1O70481 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ubr1O70481 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ubr1O70481 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ubr1O70481 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC25.54■■□□□ 1.68
Ubr1O70481 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC25.54■■□□□ 1.68
Ubr1O70481 Gm37856-201ENSMUST00000191634 999 ntBASIC25.54■■□□□ 1.68
Ubr1O70481 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ubr1O70481 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ubr1O70481 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Ubr1O70481 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC25.53■■□□□ 1.68
Ubr1O70481 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ubr1O70481 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ubr1O70481 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ubr1O70481 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC25.53■■□□□ 1.68
Ubr1O70481 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ubr1O70481 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Ubr1O70481 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Ubr1O70481 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ubr1O70481 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC25.52■■□□□ 1.68
Ubr1O70481 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ubr1O70481 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ubr1O70481 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ubr1O70481 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ubr1O70481 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ubr1O70481 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ubr1O70481 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ubr1O70481 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
Ubr1O70481 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC25.51■■□□□ 1.67
Ubr1O70481 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ubr1O70481 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Ubr1O70481 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ubr1O70481 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Ubr1O70481 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ubr1O70481 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ubr1O70481 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Ubr1O70481 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ubr1O70481 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Ubr1O70481 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Ubr1O70481 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Ubr1O70481 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Ubr1O70481 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Ubr1O70481 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr1O70481 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
Ubr1O70481 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr1O70481 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr1O70481 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC25.49■■□□□ 1.67
Ubr1O70481 Gm37563-201ENSMUST00000192580 1513 ntBASIC25.49■■□□□ 1.67
Ubr1O70481 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr1O70481 Gm3807-201ENSMUST00000193520 1168 ntBASIC25.49■■□□□ 1.67
Ubr1O70481 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr1O70481 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubr1O70481 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Ubr1O70481 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Ubr1O70481 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubr1O70481 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Ubr1O70481 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Ubr1O70481 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
Ubr1O70481 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubr1O70481 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubr1O70481 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubr1O70481 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ubr1O70481 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Ubr1O70481 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC25.47■■□□□ 1.67
Ubr1O70481 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Ubr1O70481 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ubr1O70481 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ubr1O70481 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC25.47■■□□□ 1.67
Ubr1O70481 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ubr1O70481 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms