Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ldb2O55203 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.29■□□□□ 0.68
Ldb2O55203 Gm43017-201ENSMUST00000198296 752 ntBASIC19.29■□□□□ 0.68
Ldb2O55203 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ldb2O55203 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ldb2O55203 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ldb2O55203 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.29■□□□□ 0.68
Ldb2O55203 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb2O55203 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.28■□□□□ 0.68
Ldb2O55203 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb2O55203 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Ldb2O55203 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb2O55203 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb2O55203 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ldb2O55203 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb2O55203 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb2O55203 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.28■□□□□ 0.68
Ldb2O55203 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb2O55203 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb2O55203 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb2O55203 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb2O55203 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb2O55203 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb2O55203 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ldb2O55203 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.27■□□□□ 0.68
Ldb2O55203 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ldb2O55203 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.27■□□□□ 0.68
Ldb2O55203 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ldb2O55203 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ldb2O55203 Gm11421-201ENSMUST00000122124 294 ntBASIC19.27■□□□□ 0.68
Ldb2O55203 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ldb2O55203 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ldb2O55203 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.27■□□□□ 0.68
Ldb2O55203 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ldb2O55203 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Ldb2O55203 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ldb2O55203 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Ldb2O55203 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ldb2O55203 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ldb2O55203 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Ldb2O55203 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.26■□□□□ 0.67
Ldb2O55203 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ldb2O55203 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ldb2O55203 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ldb2O55203 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ldb2O55203 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ldb2O55203 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Ldb2O55203 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ldb2O55203 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.25■□□□□ 0.67
Ldb2O55203 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ldb2O55203 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ldb2O55203 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ldb2O55203 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ldb2O55203 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ldb2O55203 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ldb2O55203 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb2O55203 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb2O55203 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.24■□□□□ 0.67
Ldb2O55203 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.24■□□□□ 0.67
Ldb2O55203 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.24■□□□□ 0.67
Ldb2O55203 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb2O55203 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb2O55203 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb2O55203 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ldb2O55203 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb2O55203 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb2O55203 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Ldb2O55203 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb2O55203 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb2O55203 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb2O55203 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb2O55203 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb2O55203 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.23■□□□□ 0.67
Ldb2O55203 Gm26833-201ENSMUST00000180899 440 ntBASIC19.23■□□□□ 0.67
Ldb2O55203 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb2O55203 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ldb2O55203 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb2O55203 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ldb2O55203 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ldb2O55203 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Ldb2O55203 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.22■□□□□ 0.67
Ldb2O55203 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ldb2O55203 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Ldb2O55203 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ldb2O55203 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Ldb2O55203 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms