Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pja1O55176 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pja1O55176 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pja1O55176 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.48■□□□□ 0.87
Pja1O55176 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pja1O55176 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pja1O55176 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pja1O55176 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pja1O55176 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pja1O55176 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pja1O55176 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.47■□□□□ 0.87
Pja1O55176 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pja1O55176 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.47■□□□□ 0.87
Pja1O55176 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pja1O55176 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Pja1O55176 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pja1O55176 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pja1O55176 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pja1O55176 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pja1O55176 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pja1O55176 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pja1O55176 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.46■□□□□ 0.87
Pja1O55176 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Pja1O55176 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.46■□□□□ 0.87
Pja1O55176 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pja1O55176 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pja1O55176 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pja1O55176 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.46■□□□□ 0.87
Pja1O55176 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pja1O55176 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pja1O55176 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.45■□□□□ 0.86
Pja1O55176 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pja1O55176 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pja1O55176 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.45■□□□□ 0.86
Pja1O55176 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pja1O55176 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pja1O55176 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pja1O55176 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pja1O55176 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pja1O55176 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pja1O55176 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pja1O55176 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pja1O55176 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pja1O55176 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.44■□□□□ 0.86
Pja1O55176 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pja1O55176 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pja1O55176 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.43■□□□□ 0.86
Pja1O55176 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.43■□□□□ 0.86
Pja1O55176 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pja1O55176 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pja1O55176 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.43■□□□□ 0.86
Pja1O55176 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pja1O55176 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pja1O55176 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pja1O55176 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pja1O55176 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.43■□□□□ 0.86
Pja1O55176 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pja1O55176 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pja1O55176 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pja1O55176 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pja1O55176 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pja1O55176 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pja1O55176 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pja1O55176 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.42■□□□□ 0.86
Pja1O55176 BC021767-201ENSMUST00000126387 1716 ntBASIC20.42■□□□□ 0.86
Pja1O55176 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pja1O55176 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pja1O55176 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pja1O55176 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Pja1O55176 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pja1O55176 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pja1O55176 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pja1O55176 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pja1O55176 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pja1O55176 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pja1O55176 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pja1O55176 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pja1O55176 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pja1O55176 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pja1O55176 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pja1O55176 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pja1O55176 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pja1O55176 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pja1O55176 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pja1O55176 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pja1O55176 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pja1O55176 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Pja1O55176 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pja1O55176 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Pja1O55176 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.39■□□□□ 0.85
Pja1O55176 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pja1O55176 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pja1O55176 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.39■□□□□ 0.85
Pja1O55176 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pja1O55176 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pja1O55176 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pja1O55176 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pja1O55176 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pja1O55176 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pja1O55176 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms