Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Matn3O35701 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Matn3O35701 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Matn3O35701 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.57■□□□□ 0.4
Matn3O35701 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Matn3O35701 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Matn3O35701 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Matn3O35701 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Matn3O35701 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.57■□□□□ 0.4
Matn3O35701 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Matn3O35701 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Matn3O35701 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Matn3O35701 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Matn3O35701 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Matn3O35701 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Matn3O35701 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Matn3O35701 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Matn3O35701 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Matn3O35701 Gm15546-201ENSMUST00000122095 826 ntBASIC17.56■□□□□ 0.4
Matn3O35701 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Matn3O35701 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Matn3O35701 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.56■□□□□ 0.4
Matn3O35701 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Matn3O35701 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.55■□□□□ 0.4
Matn3O35701 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Matn3O35701 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Matn3O35701 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Matn3O35701 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Matn3O35701 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Matn3O35701 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Matn3O35701 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Matn3O35701 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.55■□□□□ 0.4
Matn3O35701 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Matn3O35701 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.55■□□□□ 0.4
Matn3O35701 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Matn3O35701 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Matn3O35701 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Matn3O35701 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Matn3O35701 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Matn3O35701 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.54■□□□□ 0.4
Matn3O35701 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Matn3O35701 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Matn3O35701 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Matn3O35701 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Matn3O35701 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Matn3O35701 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.54■□□□□ 0.4
Matn3O35701 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.54■□□□□ 0.4
Matn3O35701 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Matn3O35701 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.54■□□□□ 0.4
Matn3O35701 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Matn3O35701 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Matn3O35701 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Matn3O35701 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Matn3O35701 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Matn3O35701 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Matn3O35701 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Matn3O35701 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.53■□□□□ 0.4
Matn3O35701 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.53■□□□□ 0.4
Matn3O35701 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Matn3O35701 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.53■□□□□ 0.4
Matn3O35701 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Matn3O35701 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Matn3O35701 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Matn3O35701 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Matn3O35701 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Matn3O35701 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Matn3O35701 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Matn3O35701 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Matn3O35701 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Matn3O35701 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Matn3O35701 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Matn3O35701 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Matn3O35701 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Matn3O35701 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Matn3O35701 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Matn3O35701 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.51■□□□□ 0.39
Matn3O35701 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Matn3O35701 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Matn3O35701 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Matn3O35701 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Matn3O35701 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Matn3O35701 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.51■□□□□ 0.39
Matn3O35701 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Matn3O35701 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Matn3O35701 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Matn3O35701 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Matn3O35701 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Matn3O35701 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Matn3O35701 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Matn3O35701 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.5■□□□□ 0.39
Matn3O35701 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Matn3O35701 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.5■□□□□ 0.39
Matn3O35701 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.5■□□□□ 0.39
Matn3O35701 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Matn3O35701 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Matn3O35701 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Matn3O35701 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Matn3O35701 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Matn3O35701 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Matn3O35701 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms