Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abca4O35600 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abca4O35600 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Abca4O35600 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abca4O35600 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.46■□□□□ 0.55
Abca4O35600 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Abca4O35600 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Abca4O35600 Gm18666-201ENSMUST00000190039 958 ntBASIC18.45■□□□□ 0.54
Abca4O35600 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abca4O35600 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Abca4O35600 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abca4O35600 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abca4O35600 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abca4O35600 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
Abca4O35600 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Abca4O35600 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Abca4O35600 Gm5867-201ENSMUST00000063197 592 ntBASIC18.45■□□□□ 0.54
Abca4O35600 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abca4O35600 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abca4O35600 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.44■□□□□ 0.54
Abca4O35600 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abca4O35600 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
Abca4O35600 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abca4O35600 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abca4O35600 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.44■□□□□ 0.54
Abca4O35600 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Abca4O35600 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Abca4O35600 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abca4O35600 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Abca4O35600 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abca4O35600 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abca4O35600 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abca4O35600 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abca4O35600 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.43■□□□□ 0.54
Abca4O35600 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abca4O35600 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abca4O35600 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Abca4O35600 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Abca4O35600 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abca4O35600 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abca4O35600 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abca4O35600 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Abca4O35600 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abca4O35600 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Abca4O35600 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Abca4O35600 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Abca4O35600 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Abca4O35600 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abca4O35600 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.41■□□□□ 0.54
Abca4O35600 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abca4O35600 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abca4O35600 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Abca4O35600 Gm13158-201ENSMUST00000122007 736 ntBASIC18.41■□□□□ 0.54
Abca4O35600 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Abca4O35600 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abca4O35600 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abca4O35600 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Abca4O35600 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Abca4O35600 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abca4O35600 Gm23634-201ENSMUST00000175071 91 ntBASIC18.4■□□□□ 0.54
Abca4O35600 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Abca4O35600 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Abca4O35600 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Abca4O35600 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abca4O35600 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Abca4O35600 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abca4O35600 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abca4O35600 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Abca4O35600 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Abca4O35600 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abca4O35600 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Abca4O35600 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Abca4O35600 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abca4O35600 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.39■□□□□ 0.53
Abca4O35600 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Abca4O35600 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.39■□□□□ 0.53
Abca4O35600 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.39■□□□□ 0.53
Abca4O35600 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Abca4O35600 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.39■□□□□ 0.53
Abca4O35600 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abca4O35600 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Abca4O35600 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Abca4O35600 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Abca4O35600 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Abca4O35600 Mir6236-201ENSMUST00000184437 123 ntBASIC18.39■□□□□ 0.53
Abca4O35600 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.39■□□□□ 0.53
Abca4O35600 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.38■□□□□ 0.53
Abca4O35600 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abca4O35600 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.38■□□□□ 0.53
Abca4O35600 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Abca4O35600 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Abca4O35600 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abca4O35600 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abca4O35600 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abca4O35600 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.37■□□□□ 0.53
Abca4O35600 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abca4O35600 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Abca4O35600 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
Abca4O35600 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abca4O35600 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms