Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn6O35454 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn6O35454 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Clcn6O35454 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn6O35454 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.29■□□□□ 0.84
Clcn6O35454 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn6O35454 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn6O35454 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn6O35454 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn6O35454 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn6O35454 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn6O35454 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn6O35454 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn6O35454 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn6O35454 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn6O35454 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn6O35454 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn6O35454 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn6O35454 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Clcn6O35454 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Clcn6O35454 Gm7143-201ENSMUST00000222811 859 ntBASIC20.28■□□□□ 0.84
Clcn6O35454 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn6O35454 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn6O35454 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn6O35454 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn6O35454 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn6O35454 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Clcn6O35454 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn6O35454 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Clcn6O35454 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.27■□□□□ 0.84
Clcn6O35454 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC20.27■□□□□ 0.84
Clcn6O35454 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.27■□□□□ 0.84
Clcn6O35454 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC20.27■□□□□ 0.84
Clcn6O35454 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn6O35454 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn6O35454 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clcn6O35454 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn6O35454 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Clcn6O35454 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Clcn6O35454 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Clcn6O35454 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn6O35454 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.26■□□□□ 0.83
Clcn6O35454 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Clcn6O35454 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn6O35454 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.26■□□□□ 0.83
Clcn6O35454 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn6O35454 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn6O35454 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn6O35454 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.25■□□□□ 0.83
Clcn6O35454 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC20.25■□□□□ 0.83
Clcn6O35454 Gm22238-201ENSMUST00000175222 88 ntBASIC20.25■□□□□ 0.83
Clcn6O35454 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC20.25■□□□□ 0.83
Clcn6O35454 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Clcn6O35454 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn6O35454 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn6O35454 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn6O35454 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn6O35454 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn6O35454 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn6O35454 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn6O35454 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn6O35454 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.24■□□□□ 0.83
Clcn6O35454 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn6O35454 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.24■□□□□ 0.83
Clcn6O35454 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.24■□□□□ 0.83
Clcn6O35454 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn6O35454 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Clcn6O35454 Arhgef33-209ENSMUST00000225223 714 ntBASIC20.24■□□□□ 0.83
Clcn6O35454 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn6O35454 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn6O35454 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn6O35454 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn6O35454 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clcn6O35454 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn6O35454 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clcn6O35454 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.23■□□□□ 0.83
Clcn6O35454 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn6O35454 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn6O35454 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn6O35454 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn6O35454 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clcn6O35454 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clcn6O35454 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn6O35454 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn6O35454 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn6O35454 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn6O35454 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn6O35454 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn6O35454 Gm15039-201ENSMUST00000118914 875 ntBASIC20.22■□□□□ 0.83
Clcn6O35454 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.22■□□□□ 0.83
Clcn6O35454 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn6O35454 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn6O35454 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn6O35454 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.22■□□□□ 0.83
Clcn6O35454 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn6O35454 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn6O35454 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn6O35454 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn6O35454 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Clcn6O35454 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms