Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx4O35137 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Alx4O35137 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Alx4O35137 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx4O35137 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Alx4O35137 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx4O35137 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Alx4O35137 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx4O35137 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx4O35137 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx4O35137 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx4O35137 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Alx4O35137 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Alx4O35137 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Alx4O35137 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Alx4O35137 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Alx4O35137 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx4O35137 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Alx4O35137 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.26■□□□□ 0.35
Alx4O35137 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Alx4O35137 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx4O35137 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx4O35137 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx4O35137 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx4O35137 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.26■□□□□ 0.35
Alx4O35137 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.26■□□□□ 0.35
Alx4O35137 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Alx4O35137 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Alx4O35137 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.26■□□□□ 0.35
Alx4O35137 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx4O35137 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Alx4O35137 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx4O35137 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.26■□□□□ 0.35
Alx4O35137 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Alx4O35137 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Alx4O35137 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx4O35137 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.25■□□□□ 0.35
Alx4O35137 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx4O35137 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx4O35137 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx4O35137 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Alx4O35137 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx4O35137 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Alx4O35137 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx4O35137 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx4O35137 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Alx4O35137 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Alx4O35137 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx4O35137 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx4O35137 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.24■□□□□ 0.35
Alx4O35137 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx4O35137 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx4O35137 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx4O35137 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx4O35137 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx4O35137 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx4O35137 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx4O35137 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx4O35137 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx4O35137 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx4O35137 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Alx4O35137 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Alx4O35137 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx4O35137 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Alx4O35137 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.23■□□□□ 0.35
Alx4O35137 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.23■□□□□ 0.35
Alx4O35137 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.23■□□□□ 0.35
Alx4O35137 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx4O35137 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx4O35137 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Alx4O35137 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Alx4O35137 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx4O35137 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx4O35137 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Alx4O35137 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Alx4O35137 Gm7417-201ENSMUST00000192950 473 ntBASIC17.22■□□□□ 0.35
Alx4O35137 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.22■□□□□ 0.35
Alx4O35137 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx4O35137 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx4O35137 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Alx4O35137 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx4O35137 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Alx4O35137 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx4O35137 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx4O35137 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx4O35137 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.21■□□□□ 0.35
Alx4O35137 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.21■□□□□ 0.35
Alx4O35137 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Alx4O35137 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.21■□□□□ 0.35
Alx4O35137 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Alx4O35137 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx4O35137 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Alx4O35137 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.21■□□□□ 0.35
Alx4O35137 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Alx4O35137 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Alx4O35137 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.2■□□□□ 0.34
Alx4O35137 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Alx4O35137 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Alx4O35137 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Alx4O35137 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms