Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OtpO09113 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.22■□□□□ 0.35
OtpO09113 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
OtpO09113 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OtpO09113 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OtpO09113 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
OtpO09113 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
OtpO09113 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
OtpO09113 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
OtpO09113 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OtpO09113 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OtpO09113 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OtpO09113 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.21■□□□□ 0.35
OtpO09113 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
OtpO09113 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
OtpO09113 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OtpO09113 AA386476-201ENSMUST00000098781 1665 ntBASIC17.2■□□□□ 0.34
OtpO09113 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OtpO09113 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OtpO09113 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OtpO09113 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OtpO09113 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OtpO09113 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
OtpO09113 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
OtpO09113 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.2■□□□□ 0.34
OtpO09113 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
OtpO09113 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
OtpO09113 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
OtpO09113 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OtpO09113 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.2■□□□□ 0.34
OtpO09113 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
OtpO09113 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
OtpO09113 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
OtpO09113 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
OtpO09113 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
OtpO09113 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
OtpO09113 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.19■□□□□ 0.34
OtpO09113 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
OtpO09113 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
OtpO09113 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.19■□□□□ 0.34
OtpO09113 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
OtpO09113 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
OtpO09113 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
OtpO09113 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
OtpO09113 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
OtpO09113 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
OtpO09113 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
OtpO09113 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
OtpO09113 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.19■□□□□ 0.34
OtpO09113 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
OtpO09113 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
OtpO09113 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
OtpO09113 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
OtpO09113 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
OtpO09113 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
OtpO09113 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
OtpO09113 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
OtpO09113 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
OtpO09113 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
OtpO09113 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
OtpO09113 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
OtpO09113 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
OtpO09113 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
OtpO09113 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
OtpO09113 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
OtpO09113 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
OtpO09113 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
OtpO09113 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.17■□□□□ 0.34
OtpO09113 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.17■□□□□ 0.34
OtpO09113 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
OtpO09113 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
OtpO09113 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OtpO09113 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.16■□□□□ 0.34
OtpO09113 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
OtpO09113 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
OtpO09113 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
OtpO09113 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
OtpO09113 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
OtpO09113 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
OtpO09113 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
OtpO09113 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
OtpO09113 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.16■□□□□ 0.34
OtpO09113 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
OtpO09113 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
OtpO09113 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
OtpO09113 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms