Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AlyrefO08583 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AlyrefO08583 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
AlyrefO08583 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AlyrefO08583 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
AlyrefO08583 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AlyrefO08583 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AlyrefO08583 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AlyrefO08583 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AlyrefO08583 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AlyrefO08583 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
AlyrefO08583 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AlyrefO08583 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
AlyrefO08583 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.58■□□□□ 0.72
AlyrefO08583 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.58■□□□□ 0.72
AlyrefO08583 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
AlyrefO08583 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AlyrefO08583 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AlyrefO08583 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AlyrefO08583 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AlyrefO08583 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AlyrefO08583 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AlyrefO08583 Gm6211-202ENSMUST00000167849 925 ntBASIC19.57■□□□□ 0.72
AlyrefO08583 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AlyrefO08583 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.57■□□□□ 0.72
AlyrefO08583 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
AlyrefO08583 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
AlyrefO08583 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AlyrefO08583 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AlyrefO08583 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
AlyrefO08583 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
AlyrefO08583 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AlyrefO08583 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.56■□□□□ 0.72
AlyrefO08583 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AlyrefO08583 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AlyrefO08583 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AlyrefO08583 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AlyrefO08583 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AlyrefO08583 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AlyrefO08583 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
AlyrefO08583 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
AlyrefO08583 Gm5643-201ENSMUST00000117081 966 ntBASIC19.55■□□□□ 0.72
AlyrefO08583 Gm10231-201ENSMUST00000181584 441 ntBASIC19.55■□□□□ 0.72
AlyrefO08583 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AlyrefO08583 Gm10517-202ENSMUST00000192970 758 ntBASIC19.55■□□□□ 0.72
AlyrefO08583 Gm10175-202ENSMUST00000208752 441 ntBASIC19.55■□□□□ 0.72
AlyrefO08583 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AlyrefO08583 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AlyrefO08583 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
AlyrefO08583 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
AlyrefO08583 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.55■□□□□ 0.72
AlyrefO08583 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
AlyrefO08583 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
AlyrefO08583 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
AlyrefO08583 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
AlyrefO08583 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AlyrefO08583 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AlyrefO08583 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.54■□□□□ 0.72
AlyrefO08583 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
AlyrefO08583 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.54■□□□□ 0.72
AlyrefO08583 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.54■□□□□ 0.72
AlyrefO08583 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.54■□□□□ 0.72
AlyrefO08583 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
AlyrefO08583 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AlyrefO08583 Gm27275-201ENSMUST00000184318 272 ntBASIC19.53■□□□□ 0.72
AlyrefO08583 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AlyrefO08583 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AlyrefO08583 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AlyrefO08583 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AlyrefO08583 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.53■□□□□ 0.72
AlyrefO08583 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
AlyrefO08583 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AlyrefO08583 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
AlyrefO08583 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AlyrefO08583 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AlyrefO08583 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
AlyrefO08583 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.52■□□□□ 0.72
AlyrefO08583 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AlyrefO08583 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AlyrefO08583 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
AlyrefO08583 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AlyrefO08583 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AlyrefO08583 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
AlyrefO08583 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AlyrefO08583 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AlyrefO08583 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
AlyrefO08583 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.51■□□□□ 0.71
AlyrefO08583 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
AlyrefO08583 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
AlyrefO08583 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.51■□□□□ 0.71
AlyrefO08583 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
AlyrefO08583 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AlyrefO08583 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AlyrefO08583 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.51■□□□□ 0.71
AlyrefO08583 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
AlyrefO08583 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
AlyrefO08583 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
AlyrefO08583 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AlyrefO08583 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AlyrefO08583 Gm43799-201ENSMUST00000201845 579 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms