Protein–RNA interactions for Protein: O08576

Rundc3a, RUN domain-containing protein 3A, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3aO08576 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rundc3aO08576 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rundc3aO08576 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rundc3aO08576 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rundc3aO08576 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rundc3aO08576 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rundc3aO08576 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rundc3aO08576 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rundc3aO08576 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rundc3aO08576 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rundc3aO08576 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rundc3aO08576 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Rundc3aO08576 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rundc3aO08576 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rundc3aO08576 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rundc3aO08576 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rundc3aO08576 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rundc3aO08576 Gm14117-201ENSMUST00000122417 843 ntBASIC18.83■□□□□ 0.6
Rundc3aO08576 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
Rundc3aO08576 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rundc3aO08576 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.83■□□□□ 0.6
Rundc3aO08576 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.83■□□□□ 0.6
Rundc3aO08576 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
Rundc3aO08576 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rundc3aO08576 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.83■□□□□ 0.6
Rundc3aO08576 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rundc3aO08576 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.83■□□□□ 0.6
Rundc3aO08576 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rundc3aO08576 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rundc3aO08576 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.82■□□□□ 0.6
Rundc3aO08576 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rundc3aO08576 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rundc3aO08576 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rundc3aO08576 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rundc3aO08576 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rundc3aO08576 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rundc3aO08576 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rundc3aO08576 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rundc3aO08576 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rundc3aO08576 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rundc3aO08576 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rundc3aO08576 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rundc3aO08576 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rundc3aO08576 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rundc3aO08576 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.81■□□□□ 0.6
Rundc3aO08576 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.81■□□□□ 0.6
Rundc3aO08576 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.81■□□□□ 0.6
Rundc3aO08576 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.81■□□□□ 0.6
Rundc3aO08576 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Rundc3aO08576 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rundc3aO08576 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rundc3aO08576 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rundc3aO08576 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rundc3aO08576 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rundc3aO08576 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.8■□□□□ 0.6
Rundc3aO08576 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rundc3aO08576 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rundc3aO08576 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rundc3aO08576 Rps24-207ENSMUST00000224568 714 ntBASIC18.8■□□□□ 0.6
Rundc3aO08576 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rundc3aO08576 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rundc3aO08576 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rundc3aO08576 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Rundc3aO08576 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rundc3aO08576 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rundc3aO08576 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rundc3aO08576 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rundc3aO08576 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.79■□□□□ 0.6
Rundc3aO08576 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.79■□□□□ 0.6
Rundc3aO08576 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rundc3aO08576 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rundc3aO08576 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rundc3aO08576 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rundc3aO08576 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rundc3aO08576 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rundc3aO08576 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.79■□□□□ 0.6
Rundc3aO08576 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rundc3aO08576 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rundc3aO08576 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rundc3aO08576 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rundc3aO08576 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rundc3aO08576 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rundc3aO08576 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rundc3aO08576 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rundc3aO08576 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.78■□□□□ 0.6
Rundc3aO08576 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rundc3aO08576 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rundc3aO08576 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rundc3aO08576 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rundc3aO08576 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rundc3aO08576 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rundc3aO08576 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rundc3aO08576 Golgb1-201ENSMUST00000023534 498 ntBASIC18.77■□□□□ 0.6
Rundc3aO08576 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rundc3aO08576 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.77■□□□□ 0.6
Rundc3aO08576 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rundc3aO08576 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rundc3aO08576 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rundc3aO08576 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rundc3aO08576 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms