Protein–RNA interactions for Protein: J3QPP8

Alkal1, ALK and LTK ligand 1, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alkal1J3QPP8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Alkal1J3QPP8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alkal1J3QPP8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Alkal1J3QPP8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Alkal1J3QPP8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alkal1J3QPP8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alkal1J3QPP8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alkal1J3QPP8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Alkal1J3QPP8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alkal1J3QPP8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alkal1J3QPP8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Alkal1J3QPP8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alkal1J3QPP8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alkal1J3QPP8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Alkal1J3QPP8 Gm21956-201ENSMUST00000179946 522 ntBASIC18.7■□□□□ 0.58
Alkal1J3QPP8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alkal1J3QPP8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alkal1J3QPP8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alkal1J3QPP8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alkal1J3QPP8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alkal1J3QPP8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alkal1J3QPP8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alkal1J3QPP8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Alkal1J3QPP8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alkal1J3QPP8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Alkal1J3QPP8 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.69■□□□□ 0.58
Alkal1J3QPP8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alkal1J3QPP8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alkal1J3QPP8 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.69■□□□□ 0.58
Alkal1J3QPP8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alkal1J3QPP8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alkal1J3QPP8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alkal1J3QPP8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alkal1J3QPP8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alkal1J3QPP8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alkal1J3QPP8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Alkal1J3QPP8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Alkal1J3QPP8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alkal1J3QPP8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Alkal1J3QPP8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alkal1J3QPP8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alkal1J3QPP8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Alkal1J3QPP8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alkal1J3QPP8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Alkal1J3QPP8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Alkal1J3QPP8 Gm12251-201ENSMUST00000117893 792 ntBASIC18.67■□□□□ 0.58
Alkal1J3QPP8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.67■□□□□ 0.58
Alkal1J3QPP8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.67■□□□□ 0.58
Alkal1J3QPP8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alkal1J3QPP8 Gm13241-201ENSMUST00000094493 780 ntBASIC18.67■□□□□ 0.58
Alkal1J3QPP8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alkal1J3QPP8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.67■□□□□ 0.58
Alkal1J3QPP8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alkal1J3QPP8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Alkal1J3QPP8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.66■□□□□ 0.58
Alkal1J3QPP8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.66■□□□□ 0.58
Alkal1J3QPP8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Alkal1J3QPP8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alkal1J3QPP8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alkal1J3QPP8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Alkal1J3QPP8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alkal1J3QPP8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alkal1J3QPP8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.65■□□□□ 0.58
Alkal1J3QPP8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Alkal1J3QPP8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alkal1J3QPP8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alkal1J3QPP8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Alkal1J3QPP8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alkal1J3QPP8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Alkal1J3QPP8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
Alkal1J3QPP8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Alkal1J3QPP8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Alkal1J3QPP8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Alkal1J3QPP8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Alkal1J3QPP8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Alkal1J3QPP8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.64■□□□□ 0.57
Alkal1J3QPP8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.64■□□□□ 0.57
Alkal1J3QPP8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alkal1J3QPP8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Alkal1J3QPP8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Alkal1J3QPP8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alkal1J3QPP8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alkal1J3QPP8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Alkal1J3QPP8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Alkal1J3QPP8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alkal1J3QPP8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms