Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.37■□□□□ 0.69
Gm3139J3QK78 Gm18671-201ENSMUST00000214826 683 ntBASIC19.37■□□□□ 0.69
Gm3139J3QK78 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3139J3QK78 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3139J3QK78 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3139J3QK78 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3139J3QK78 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gm3139J3QK78 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3139J3QK78 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3139J3QK78 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3139J3QK78 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3139J3QK78 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3139J3QK78 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3139J3QK78 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3139J3QK78 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3139J3QK78 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3139J3QK78 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3139J3QK78 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3139J3QK78 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3139J3QK78 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3139J3QK78 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gm3139J3QK78 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3139J3QK78 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3139J3QK78 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Gm3139J3QK78 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3139J3QK78 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Gm3139J3QK78 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3139J3QK78 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3139J3QK78 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3139J3QK78 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3139J3QK78 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3139J3QK78 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3139J3QK78 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
Gm3139J3QK78 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3139J3QK78 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3139J3QK78 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3139J3QK78 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3139J3QK78 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.34■□□□□ 0.69
Gm3139J3QK78 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3139J3QK78 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3139J3QK78 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm3139J3QK78 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Gm3139J3QK78 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm3139J3QK78 Gm13234-201ENSMUST00000120010 747 ntBASIC19.33■□□□□ 0.68
Gm3139J3QK78 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Gm3139J3QK78 Gm10033-202ENSMUST00000211874 928 ntBASIC19.33■□□□□ 0.68
Gm3139J3QK78 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.33■□□□□ 0.68
Gm3139J3QK78 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3139J3QK78 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3139J3QK78 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3139J3QK78 Reep4-203ENSMUST00000226563 1444 ntBASIC19.33■□□□□ 0.68
Gm3139J3QK78 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3139J3QK78 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3139J3QK78 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.32■□□□□ 0.68
Gm3139J3QK78 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Gm3139J3QK78 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3139J3QK78 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3139J3QK78 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3139J3QK78 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gm3139J3QK78 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.31■□□□□ 0.68
Gm3139J3QK78 Gm26571-201ENSMUST00000181399 666 ntBASIC19.31■□□□□ 0.68
Gm3139J3QK78 Gm42569-201ENSMUST00000200539 472 ntBASIC19.31■□□□□ 0.68
Gm3139J3QK78 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3139J3QK78 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3139J3QK78 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3139J3QK78 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.31■□□□□ 0.68
Gm3139J3QK78 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3139J3QK78 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3139J3QK78 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.3■□□□□ 0.68
Gm3139J3QK78 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3139J3QK78 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.3■□□□□ 0.68
Gm3139J3QK78 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.3■□□□□ 0.68
Gm3139J3QK78 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3139J3QK78 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.3■□□□□ 0.68
Gm3139J3QK78 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3139J3QK78 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Gm3139J3QK78 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Gm3139J3QK78 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3139J3QK78 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Gm3139J3QK78 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3139J3QK78 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3139J3QK78 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3139J3QK78 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3139J3QK78 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3139J3QK78 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3139J3QK78 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3139J3QK78 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3139J3QK78 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.29■□□□□ 0.68
Gm3139J3QK78 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.29■□□□□ 0.68
Gm3139J3QK78 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3139J3QK78 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Gm3139J3QK78 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gm3139J3QK78 Gm10849-201ENSMUST00000100397 618 ntBASIC19.28■□□□□ 0.68
Gm3139J3QK78 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.28■□□□□ 0.68
Gm3139J3QK78 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.28■□□□□ 0.68
Gm3139J3QK78 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.28■□□□□ 0.68
Gm3139J3QK78 AV356131-201ENSMUST00000206201 750 ntBASIC19.28■□□□□ 0.68
Gm3139J3QK78 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3139J3QK78 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3139J3QK78 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms