Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 H2-K2-201ENSMUST00000174250 1049 ntBASIC9.57□□□□□ -0.88
Rnf213E9Q555 Alkbh1-212ENSMUST00000185301 408 ntBASIC9.57□□□□□ -0.88
Rnf213E9Q555 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 AC153962.1-201ENSMUST00000218530 1948 ntBASIC9.57□□□□□ -0.88
Rnf213E9Q555 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC9.57□□□□□ -0.88
Rnf213E9Q555 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Mir6236-201ENSMUST00000184437 123 ntBASIC9.57□□□□□ -0.88
Rnf213E9Q555 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC9.57□□□□□ -0.88
Rnf213E9Q555 Gm8668-201ENSMUST00000120559 1447 ntBASIC9.57□□□□□ -0.88
Rnf213E9Q555 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rnf213E9Q555 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rnf213E9Q555 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rnf213E9Q555 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rnf213E9Q555 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Rnf213E9Q555 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC9.55□□□□□ -0.88
Rnf213E9Q555 Gm9103-201ENSMUST00000119371 405 ntBASIC9.55□□□□□ -0.88
Rnf213E9Q555 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC9.55□□□□□ -0.88
Rnf213E9Q555 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rnf213E9Q555 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Rnf213E9Q555 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rnf213E9Q555 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rnf213E9Q555 AC131586.2-201ENSMUST00000228370 1512 ntBASIC9.55□□□□□ -0.88
Rnf213E9Q555 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rnf213E9Q555 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
Rnf213E9Q555 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC9.55□□□□□ -0.88
Rnf213E9Q555 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC9.55□□□□□ -0.88
Rnf213E9Q555 Gm11539-201ENSMUST00000119837 557 ntBASIC9.55□□□□□ -0.88
Rnf213E9Q555 Gm13436-201ENSMUST00000120418 567 ntBASIC9.55□□□□□ -0.88
Rnf213E9Q555 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rnf213E9Q555 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rnf213E9Q555 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rnf213E9Q555 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Gm17971-201ENSMUST00000190239 806 ntBASIC9.54□□□□□ -0.88
Rnf213E9Q555 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Gm7889-201ENSMUST00000185591 958 ntBASIC9.54□□□□□ -0.88
Rnf213E9Q555 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rnf213E9Q555 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rnf213E9Q555 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Rnf213E9Q555 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Rnf213E9Q555 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rnf213E9Q555 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rnf213E9Q555 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rnf213E9Q555 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rnf213E9Q555 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rnf213E9Q555 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rnf213E9Q555 Gm42911-201ENSMUST00000199360 1630 ntBASIC9.53□□□□□ -0.88
Rnf213E9Q555 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rnf213E9Q555 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rnf213E9Q555 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rnf213E9Q555 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rnf213E9Q555 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Rnf213E9Q555 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms