Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.44■□□□□ 0.22
Cpsf4lE9Q2N0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4lE9Q2N0 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.44■□□□□ 0.22
Cpsf4lE9Q2N0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4lE9Q2N0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4lE9Q2N0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4lE9Q2N0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4lE9Q2N0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4lE9Q2N0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4lE9Q2N0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4lE9Q2N0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4lE9Q2N0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.41■□□□□ 0.22
Cpsf4lE9Q2N0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4lE9Q2N0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4lE9Q2N0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Cpsf4lE9Q2N0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cpsf4lE9Q2N0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Cpsf4lE9Q2N0 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.41■□□□□ 0.22
Cpsf4lE9Q2N0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4lE9Q2N0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4lE9Q2N0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4lE9Q2N0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cpsf4lE9Q2N0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Gm43060-201ENSMUST00000200621 289 ntBASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4lE9Q2N0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4lE9Q2N0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4lE9Q2N0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4lE9Q2N0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4lE9Q2N0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.39■□□□□ 0.21
Cpsf4lE9Q2N0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.39■□□□□ 0.21
Cpsf4lE9Q2N0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cpsf4lE9Q2N0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4lE9Q2N0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4lE9Q2N0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cpsf4lE9Q2N0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4lE9Q2N0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4lE9Q2N0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4lE9Q2N0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.38■□□□□ 0.21
Cpsf4lE9Q2N0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4lE9Q2N0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4lE9Q2N0 Gm27801-201ENSMUST00000184174 223 ntBASIC16.38■□□□□ 0.21
Cpsf4lE9Q2N0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4lE9Q2N0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4lE9Q2N0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4lE9Q2N0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4lE9Q2N0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4lE9Q2N0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4lE9Q2N0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cpsf4lE9Q2N0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4lE9Q2N0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4lE9Q2N0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cpsf4lE9Q2N0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Cpsf4lE9Q2N0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.37■□□□□ 0.21
Cpsf4lE9Q2N0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4lE9Q2N0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms