Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shank1D3YZU1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shank1D3YZU1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.35■□□□□ 0.37
Shank1D3YZU1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.35■□□□□ 0.37
Shank1D3YZU1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shank1D3YZU1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Shank1D3YZU1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shank1D3YZU1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shank1D3YZU1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Shank1D3YZU1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shank1D3YZU1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shank1D3YZU1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shank1D3YZU1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shank1D3YZU1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shank1D3YZU1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shank1D3YZU1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Shank1D3YZU1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Shank1D3YZU1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Shank1D3YZU1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shank1D3YZU1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shank1D3YZU1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shank1D3YZU1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shank1D3YZU1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shank1D3YZU1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.34■□□□□ 0.37
Shank1D3YZU1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shank1D3YZU1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shank1D3YZU1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shank1D3YZU1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shank1D3YZU1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.33■□□□□ 0.37
Shank1D3YZU1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Shank1D3YZU1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Shank1D3YZU1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shank1D3YZU1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shank1D3YZU1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shank1D3YZU1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Shank1D3YZU1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shank1D3YZU1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Shank1D3YZU1 Gm715-201ENSMUST00000117865 831 ntBASIC17.33■□□□□ 0.36
Shank1D3YZU1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Shank1D3YZU1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Shank1D3YZU1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Shank1D3YZU1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.33■□□□□ 0.36
Shank1D3YZU1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shank1D3YZU1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Shank1D3YZU1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shank1D3YZU1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shank1D3YZU1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Shank1D3YZU1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Shank1D3YZU1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shank1D3YZU1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shank1D3YZU1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shank1D3YZU1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.32■□□□□ 0.36
Shank1D3YZU1 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.32■□□□□ 0.36
Shank1D3YZU1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Shank1D3YZU1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.32■□□□□ 0.36
Shank1D3YZU1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.31■□□□□ 0.36
Shank1D3YZU1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank1D3YZU1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Shank1D3YZU1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.3■□□□□ 0.36
Shank1D3YZU1 Gm27275-201ENSMUST00000184318 272 ntBASIC17.3■□□□□ 0.36
Shank1D3YZU1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank1D3YZU1 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.3■□□□□ 0.36
Shank1D3YZU1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank1D3YZU1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank1D3YZU1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Shank1D3YZU1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank1D3YZU1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Shank1D3YZU1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Shank1D3YZU1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank1D3YZU1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank1D3YZU1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank1D3YZU1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Shank1D3YZU1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank1D3YZU1 Gm5643-201ENSMUST00000117081 966 ntBASIC17.29■□□□□ 0.36
Shank1D3YZU1 Gm13836-201ENSMUST00000121159 501 ntBASIC17.29■□□□□ 0.36
Shank1D3YZU1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.29■□□□□ 0.36
Shank1D3YZU1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.29■□□□□ 0.36
Shank1D3YZU1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank1D3YZU1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank1D3YZU1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank1D3YZU1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Shank1D3YZU1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Shank1D3YZU1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shank1D3YZU1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank1D3YZU1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms