Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm12887B1AVM1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm12887B1AVM1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm12887B1AVM1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.66■□□□□ 0.1
Gm12887B1AVM1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm12887B1AVM1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.66■□□□□ 0.1
Gm12887B1AVM1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm12887B1AVM1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.66■□□□□ 0.1
Gm12887B1AVM1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Gm12887B1AVM1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm12887B1AVM1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.66■□□□□ 0.1
Gm12887B1AVM1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Gm12887B1AVM1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm12887B1AVM1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Mir6236-201ENSMUST00000184437 123 ntBASIC15.65■□□□□ 0.1
Gm12887B1AVM1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm12887B1AVM1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
Gm12887B1AVM1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Rarb-207ENSMUST00000225921 2756 ntBASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm12887B1AVM1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.63■□□□□ 0.09
Gm12887B1AVM1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Gm7143-201ENSMUST00000222811 859 ntBASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 BC021767-201ENSMUST00000126387 1716 ntBASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm12887B1AVM1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm12887B1AVM1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm12887B1AVM1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms