Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm11127A7VMS2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm11127A7VMS2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Gm11127A7VMS2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gm11127A7VMS2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm11127A7VMS2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.08■□□□□ 0.33
Gm11127A7VMS2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11127A7VMS2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11127A7VMS2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Gm11127A7VMS2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11127A7VMS2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11127A7VMS2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gm11127A7VMS2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gm11127A7VMS2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11127A7VMS2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11127A7VMS2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11127A7VMS2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Gm11127A7VMS2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11127A7VMS2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11127A7VMS2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11127A7VMS2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11127A7VMS2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11127A7VMS2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11127A7VMS2 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.07■□□□□ 0.32
Gm11127A7VMS2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11127A7VMS2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Gm11127A7VMS2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11127A7VMS2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Gm11127A7VMS2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Gm11127A7VMS2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Gm11127A7VMS2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11127A7VMS2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11127A7VMS2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11127A7VMS2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11127A7VMS2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11127A7VMS2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.06■□□□□ 0.32
Gm11127A7VMS2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Gm11127A7VMS2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11127A7VMS2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11127A7VMS2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11127A7VMS2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.05■□□□□ 0.32
Gm11127A7VMS2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11127A7VMS2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm11127A7VMS2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm11127A7VMS2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm11127A7VMS2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm11127A7VMS2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm11127A7VMS2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.04■□□□□ 0.32
Gm11127A7VMS2 Gm5812-201ENSMUST00000061073 957 ntBASIC17.04■□□□□ 0.32
Gm11127A7VMS2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm11127A7VMS2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm11127A7VMS2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm11127A7VMS2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Gm11127A7VMS2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Gm11127A7VMS2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm11127A7VMS2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gm11127A7VMS2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Gm11127A7VMS2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.02■□□□□ 0.32
Gm11127A7VMS2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm11127A7VMS2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm11127A7VMS2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm11127A7VMS2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm11127A7VMS2 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.02■□□□□ 0.32
Gm11127A7VMS2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms