Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d4bA6X942 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d4bA6X942 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Sh2d4bA6X942 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Sh2d4bA6X942 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.67■□□□□ 0.9
Sh2d4bA6X942 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Sh2d4bA6X942 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d4bA6X942 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d4bA6X942 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d4bA6X942 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d4bA6X942 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d4bA6X942 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d4bA6X942 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sh2d4bA6X942 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh2d4bA6X942 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sh2d4bA6X942 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh2d4bA6X942 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sh2d4bA6X942 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh2d4bA6X942 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh2d4bA6X942 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Sh2d4bA6X942 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sh2d4bA6X942 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.66■□□□□ 0.9
Sh2d4bA6X942 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh2d4bA6X942 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sh2d4bA6X942 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh2d4bA6X942 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sh2d4bA6X942 Gm13234-201ENSMUST00000120010 747 ntBASIC20.65■□□□□ 0.9
Sh2d4bA6X942 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.65■□□□□ 0.9
Sh2d4bA6X942 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.65■□□□□ 0.9
Sh2d4bA6X942 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.65■□□□□ 0.9
Sh2d4bA6X942 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Sh2d4bA6X942 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Sh2d4bA6X942 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sh2d4bA6X942 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.65■□□□□ 0.9
Sh2d4bA6X942 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Sh2d4bA6X942 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh2d4bA6X942 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh2d4bA6X942 Gm12441-201ENSMUST00000121806 588 ntBASIC20.64■□□□□ 0.89
Sh2d4bA6X942 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.64■□□□□ 0.89
Sh2d4bA6X942 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh2d4bA6X942 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Sh2d4bA6X942 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh2d4bA6X942 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.63■□□□□ 0.89
Sh2d4bA6X942 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4bA6X942 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4bA6X942 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sh2d4bA6X942 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4bA6X942 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4bA6X942 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4bA6X942 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Sh2d4bA6X942 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.62■□□□□ 0.89
Sh2d4bA6X942 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.62■□□□□ 0.89
Sh2d4bA6X942 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4bA6X942 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Sh2d4bA6X942 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4bA6X942 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sh2d4bA6X942 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.62■□□□□ 0.89
Sh2d4bA6X942 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4bA6X942 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4bA6X942 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4bA6X942 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d4bA6X942 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d4bA6X942 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Sh2d4bA6X942 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Sh2d4bA6X942 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.61■□□□□ 0.89
Sh2d4bA6X942 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.61■□□□□ 0.89
Sh2d4bA6X942 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d4bA6X942 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d4bA6X942 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d4bA6X942 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d4bA6X942 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d4bA6X942 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d4bA6X942 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d4bA6X942 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.6■□□□□ 0.89
Sh2d4bA6X942 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d4bA6X942 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d4bA6X942 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d4bA6X942 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Sh2d4bA6X942 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms