Protein–RNA interactions for Protein: A1L3C8

Gm5089, EG328479 protein, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5089A1L3C8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Gm5089A1L3C8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Gm5089A1L3C8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Gm5089A1L3C8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Gm5089A1L3C8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Gm5089A1L3C8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Gm5089A1L3C8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm5089A1L3C8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Gm5089A1L3C8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Gm5089A1L3C8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Gm5089A1L3C8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm5089A1L3C8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm5089A1L3C8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm5089A1L3C8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
Gm5089A1L3C8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm5089A1L3C8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Gm5089A1L3C8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm5089A1L3C8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm5089A1L3C8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm5089A1L3C8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm5089A1L3C8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm5089A1L3C8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm5089A1L3C8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm5089A1L3C8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Gm5089A1L3C8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm5089A1L3C8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm5089A1L3C8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Gm5089A1L3C8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm5089A1L3C8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm5089A1L3C8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Gm5089A1L3C8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm5089A1L3C8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.55■□□□□ 0.08
Gm5089A1L3C8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5089A1L3C8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5089A1L3C8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5089A1L3C8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5089A1L3C8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5089A1L3C8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5089A1L3C8 Gm10252-201ENSMUST00000209541 832 ntBASIC15.54■□□□□ 0.08
Gm5089A1L3C8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Gm5089A1L3C8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5089A1L3C8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5089A1L3C8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5089A1L3C8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5089A1L3C8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5089A1L3C8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gm5089A1L3C8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Gm13168-201ENSMUST00000121771 632 ntBASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Gm6211-202ENSMUST00000167849 925 ntBASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.53■□□□□ 0.08
Gm5089A1L3C8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm5089A1L3C8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm5089A1L3C8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm5089A1L3C8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm5089A1L3C8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Gm5089A1L3C8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm5089A1L3C8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.52■□□□□ 0.08
Gm5089A1L3C8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
Gm5089A1L3C8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm5089A1L3C8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Gm5089A1L3C8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.52■□□□□ 0.07
Gm5089A1L3C8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm5089A1L3C8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm5089A1L3C8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm5089A1L3C8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm5089A1L3C8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Gm5089A1L3C8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.51■□□□□ 0.07
Gm5089A1L3C8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Gm5089A1L3C8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm5089A1L3C8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Gm5089A1L3C8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.51■□□□□ 0.07
Gm5089A1L3C8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms