Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Gm12821-201ENSMUST00000120022 600 ntBASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Trbv17A0A140T8P8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv17A0A140T8P8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv17A0A140T8P8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv17A0A140T8P8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv17A0A140T8P8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv17A0A140T8P8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Trbv17A0A140T8P8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv17A0A140T8P8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv17A0A140T8P8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trbv17A0A140T8P8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.79□□□□□ -0.04
Trbv17A0A140T8P8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv17A0A140T8P8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.79□□□□□ -0.04
Trbv17A0A140T8P8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv17A0A140T8P8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trbv17A0A140T8P8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv17A0A140T8P8 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbv17A0A140T8P8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trbv17A0A140T8P8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.77□□□□□ -0.04
Trbv17A0A140T8P8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv17A0A140T8P8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trbv17A0A140T8P8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trbv17A0A140T8P8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv17A0A140T8P8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv17A0A140T8P8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv17A0A140T8P8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv17A0A140T8P8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trbv17A0A140T8P8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trbv17A0A140T8P8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv17A0A140T8P8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv17A0A140T8P8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv17A0A140T8P8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms