Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Gm13238-201ENSMUST00000117655 780 ntBASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Gm43566-201ENSMUST00000196851 808 ntBASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Gm5921-201ENSMUST00000075898 882 ntBASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC12.78□□□□□ -0.36
Igkv1-88A0A140T8N1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Igkv1-88A0A140T8N1 Hsf1-204ENSMUST00000226872 2104 ntBASIC12.77□□□□□ -0.36
Igkv1-88A0A140T8N1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Igkv1-88A0A140T8N1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv1-88A0A140T8N1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv1-88A0A140T8N1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Igkv1-88A0A140T8N1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv1-88A0A140T8N1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv1-88A0A140T8N1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Igkv1-88A0A140T8N1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv1-88A0A140T8N1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv1-88A0A140T8N1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.76□□□□□ -0.37
Igkv1-88A0A140T8N1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv1-88A0A140T8N1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv1-88A0A140T8N1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv1-88A0A140T8N1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv1-88A0A140T8N1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv1-88A0A140T8N1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv1-88A0A140T8N1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.74□□□□□ -0.37
Igkv1-88A0A140T8N1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
Igkv1-88A0A140T8N1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv1-88A0A140T8N1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv1-88A0A140T8N1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv1-88A0A140T8N1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv1-88A0A140T8N1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv1-88A0A140T8N1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms