Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3n-3A0A0G2JEM0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms