Protein–RNA interactions for Protein: A0A0B4J1K3

B230359F08Rik, RIKEN cDNA B230359F08 gene (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B230359F08RikA0A0B4J1K3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
B230359F08RikA0A0B4J1K3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
B230359F08RikA0A0B4J1K3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.18□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.17□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Etf1-202ENSMUST00000180351 108 ntBASIC13.17□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.17□□□□□ -0.3
B230359F08RikA0A0B4J1K3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
B230359F08RikA0A0B4J1K3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
B230359F08RikA0A0B4J1K3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
B230359F08RikA0A0B4J1K3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms