Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm6311-201ENSMUST00000073790 878 ntBASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-3A0A0B4J1K1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Grk6-206ENSMUST00000224995 2971 ntBASIC13.21□□□□□ -0.29
Trav4-3A0A0B4J1K1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4-3A0A0B4J1K1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4-3A0A0B4J1K1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4-3A0A0B4J1K1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4-3A0A0B4J1K1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4-3A0A0B4J1K1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-3A0A0B4J1K1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-3A0A0B4J1K1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-3A0A0B4J1K1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-3A0A0B4J1K1 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.2□□□□□ -0.3
Trav4-3A0A0B4J1K1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-3A0A0B4J1K1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-3A0A0B4J1K1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-3A0A0B4J1K1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-3A0A0B4J1K1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-3A0A0B4J1K1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-3A0A0B4J1K1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav4-3A0A0B4J1K1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-3A0A0B4J1K1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-3A0A0B4J1K1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-3A0A0B4J1K1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Scarna2-201ENSMUST00000157560 414 ntBASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Gm16437-201ENSMUST00000025669 507 ntBASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-3A0A0B4J1K1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-3A0A0B4J1K1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-3A0A0B4J1K1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms