Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv20A0A0B4J1H5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trbv20A0A0B4J1H5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv20A0A0B4J1H5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv20A0A0B4J1H5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv20A0A0B4J1H5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv20A0A0B4J1H5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv20A0A0B4J1H5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv20A0A0B4J1H5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv20A0A0B4J1H5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv20A0A0B4J1H5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv20A0A0B4J1H5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trbv20A0A0B4J1H5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trbv20A0A0B4J1H5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv20A0A0B4J1H5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv20A0A0B4J1H5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv20A0A0B4J1H5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trbv20A0A0B4J1H5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv20A0A0B4J1H5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv20A0A0B4J1H5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trbv20A0A0B4J1H5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trbv20A0A0B4J1H5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.33■□□□□ 0.36
Trbv20A0A0B4J1H5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv20A0A0B4J1H5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv20A0A0B4J1H5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv20A0A0B4J1H5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv20A0A0B4J1H5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv20A0A0B4J1H5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.32■□□□□ 0.36
Trbv20A0A0B4J1H5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv20A0A0B4J1H5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv20A0A0B4J1H5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.32■□□□□ 0.36
Trbv20A0A0B4J1H5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv20A0A0B4J1H5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv20A0A0B4J1H5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trbv20A0A0B4J1H5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv20A0A0B4J1H5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv20A0A0B4J1H5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trbv20A0A0B4J1H5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv20A0A0B4J1H5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv20A0A0B4J1H5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv20A0A0B4J1H5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv20A0A0B4J1H5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv20A0A0B4J1H5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trbv20A0A0B4J1H5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv20A0A0B4J1H5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv20A0A0B4J1H5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Gm12366-201ENSMUST00000121722 873 ntBASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Gm5786-201ENSMUST00000085368 882 ntBASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv20A0A0B4J1H5 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Gm11175-201ENSMUST00000116172 543 ntBASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trbv20A0A0B4J1H5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv20A0A0B4J1H5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms