Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv16A0A0B4J1H3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv16A0A0B4J1H3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trbv16A0A0B4J1H3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv16A0A0B4J1H3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv16A0A0B4J1H3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv16A0A0B4J1H3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv16A0A0B4J1H3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv16A0A0B4J1H3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv16A0A0B4J1H3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv16A0A0B4J1H3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv16A0A0B4J1H3 Golph3-205ENSMUST00000228671 2842 ntBASIC13.97□□□□□ -0.17
Trbv16A0A0B4J1H3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv16A0A0B4J1H3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv16A0A0B4J1H3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trbv16A0A0B4J1H3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv16A0A0B4J1H3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trbv16A0A0B4J1H3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.96□□□□□ -0.17
Trbv16A0A0B4J1H3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv16A0A0B4J1H3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Trbv16A0A0B4J1H3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv16A0A0B4J1H3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv16A0A0B4J1H3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms