Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv3A0A0A6YYE2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv3A0A0A6YYE2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv3A0A0A6YYE2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv3A0A0A6YYE2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv3A0A0A6YYE2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv3A0A0A6YYE2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv3A0A0A6YYE2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv3A0A0A6YYE2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv3A0A0A6YYE2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv3A0A0A6YYE2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.91□□□□□ -0.02
Trbv3A0A0A6YYE2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv3A0A0A6YYE2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv3A0A0A6YYE2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv3A0A0A6YYE2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv3A0A0A6YYE2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv3A0A0A6YYE2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Trbv3A0A0A6YYE2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv3A0A0A6YYE2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv3A0A0A6YYE2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trbv3A0A0A6YYE2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv3A0A0A6YYE2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms