Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-47A0A0A6YY41 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-47A0A0A6YY41 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.96■□□□□ 0.15
Ighv1-47A0A0A6YY41 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.96■□□□□ 0.15
Ighv1-47A0A0A6YY41 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.96■□□□□ 0.15
Ighv1-47A0A0A6YY41 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-47A0A0A6YY41 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ighv1-47A0A0A6YY41 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ighv1-47A0A0A6YY41 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.95■□□□□ 0.14
Ighv1-47A0A0A6YY41 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-47A0A0A6YY41 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.95■□□□□ 0.14
Ighv1-47A0A0A6YY41 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Ighv1-47A0A0A6YY41 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-47A0A0A6YY41 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-47A0A0A6YY41 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ighv1-47A0A0A6YY41 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-47A0A0A6YY41 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-47A0A0A6YY41 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.95■□□□□ 0.14
Ighv1-47A0A0A6YY41 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-47A0A0A6YY41 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.94■□□□□ 0.14
Ighv1-47A0A0A6YY41 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-47A0A0A6YY41 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ighv1-47A0A0A6YY41 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-47A0A0A6YY41 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-47A0A0A6YY41 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ighv1-47A0A0A6YY41 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-47A0A0A6YY41 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-47A0A0A6YY41 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-47A0A0A6YY41 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-47A0A0A6YY41 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ighv1-47A0A0A6YY41 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ighv1-47A0A0A6YY41 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-47A0A0A6YY41 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ighv1-47A0A0A6YY41 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-47A0A0A6YY41 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-47A0A0A6YY41 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-47A0A0A6YY41 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-47A0A0A6YY41 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-47A0A0A6YY41 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-47A0A0A6YY41 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.92■□□□□ 0.14
Ighv1-47A0A0A6YY41 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.92■□□□□ 0.14
Ighv1-47A0A0A6YY41 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.92■□□□□ 0.14
Ighv1-47A0A0A6YY41 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-47A0A0A6YY41 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.92■□□□□ 0.14
Ighv1-47A0A0A6YY41 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-47A0A0A6YY41 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-47A0A0A6YY41 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-47A0A0A6YY41 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.91■□□□□ 0.14
Ighv1-47A0A0A6YY41 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.91■□□□□ 0.14
Ighv1-47A0A0A6YY41 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.91■□□□□ 0.14
Ighv1-47A0A0A6YY41 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
Ighv1-47A0A0A6YY41 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-47A0A0A6YY41 Gm13241-201ENSMUST00000094493 780 ntBASIC15.91■□□□□ 0.14
Ighv1-47A0A0A6YY41 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-47A0A0A6YY41 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-47A0A0A6YY41 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ighv1-47A0A0A6YY41 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-47A0A0A6YY41 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-47A0A0A6YY41 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-47A0A0A6YY41 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-47A0A0A6YY41 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-47A0A0A6YY41 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-47A0A0A6YY41 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-47A0A0A6YY41 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.9■□□□□ 0.14
Ighv1-47A0A0A6YY41 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.9■□□□□ 0.14
Ighv1-47A0A0A6YY41 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-47A0A0A6YY41 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-47A0A0A6YY41 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-47A0A0A6YY41 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.9■□□□□ 0.14
Ighv1-47A0A0A6YY41 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-47A0A0A6YY41 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-47A0A0A6YY41 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms