Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.14■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Gm13534-201ENSMUST00000121169 513 ntBASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Gm6211-202ENSMUST00000167849 925 ntBASIC16.12■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-4A0A0A6YXF1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.12■□□□□ 0.17
Ighv3-4A0A0A6YXF1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.12■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.09■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.09■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.08■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.08■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ighv3-4A0A0A6YXF1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.08■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.07■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms