Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 Gm42569-201ENSMUST00000200539 472 ntBASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.67■□□□□ 0.1
Ighv1-20A0A0A6YX66 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-20A0A0A6YX66 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-20A0A0A6YX66 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Ighv1-20A0A0A6YX66 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-20A0A0A6YX66 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.65■□□□□ 0.1
Ighv1-20A0A0A6YX66 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-20A0A0A6YX66 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-20A0A0A6YX66 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-20A0A0A6YX66 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-20A0A0A6YX66 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-20A0A0A6YX66 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-20A0A0A6YX66 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
Ighv1-20A0A0A6YX66 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv1-20A0A0A6YX66 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.65■□□□□ 0.1
Ighv1-20A0A0A6YX66 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Ighv1-20A0A0A6YX66 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.1
Ighv1-20A0A0A6YX66 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ighv1-20A0A0A6YX66 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ighv1-20A0A0A6YX66 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-20A0A0A6YX66 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ighv1-20A0A0A6YX66 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Ighv1-20A0A0A6YX66 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-20A0A0A6YX66 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-20A0A0A6YX66 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.64■□□□□ 0.09
Ighv1-20A0A0A6YX66 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-20A0A0A6YX66 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-20A0A0A6YX66 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-20A0A0A6YX66 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.63■□□□□ 0.09
Ighv1-20A0A0A6YX66 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ighv1-20A0A0A6YX66 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ighv1-20A0A0A6YX66 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ighv1-20A0A0A6YX66 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Ighv1-20A0A0A6YX66 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.63■□□□□ 0.09
Ighv1-20A0A0A6YX66 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-20A0A0A6YX66 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-20A0A0A6YX66 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-20A0A0A6YX66 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-20A0A0A6YX66 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-20A0A0A6YX66 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-20A0A0A6YX66 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Gm10033-202ENSMUST00000211874 928 ntBASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-20A0A0A6YX66 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-20A0A0A6YX66 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-20A0A0A6YX66 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-20A0A0A6YX66 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-20A0A0A6YX66 Gm26571-201ENSMUST00000181399 666 ntBASIC15.61■□□□□ 0.09
Ighv1-20A0A0A6YX66 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.61■□□□□ 0.09
Ighv1-20A0A0A6YX66 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ighv1-20A0A0A6YX66 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.61■□□□□ 0.09
Ighv1-20A0A0A6YX66 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-20A0A0A6YX66 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-20A0A0A6YX66 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-20A0A0A6YX66 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-20A0A0A6YX66 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms