Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6-5A0A075B6B5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Gm7143-201ENSMUST00000222811 859 ntBASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-5A0A075B6B5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-5A0A075B6B5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-5A0A075B6B5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-5A0A075B6B5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-5A0A075B6B5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-5A0A075B6B5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.98□□□□□ -0.01
Trav6-5A0A075B6B5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav6-5A0A075B6B5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav6-5A0A075B6B5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-5A0A075B6B5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-5A0A075B6B5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
Trav6-5A0A075B6B5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-5A0A075B6B5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-5A0A075B6B5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Gm7332-201ENSMUST00000118351 454 ntBASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-5A0A075B6B5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6-5A0A075B6B5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6-5A0A075B6B5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6-5A0A075B6B5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6-5A0A075B6B5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6-5A0A075B6B5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-5A0A075B6B5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-5A0A075B6B5 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.95□□□□□ -0.02
Trav6-5A0A075B6B5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-5A0A075B6B5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-5A0A075B6B5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-5A0A075B6B5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav6-5A0A075B6B5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav6-5A0A075B6B5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-5A0A075B6B5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-5A0A075B6B5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav6-5A0A075B6B5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav6-5A0A075B6B5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-5A0A075B6B5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-5A0A075B6B5 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms