Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12d-3A0A075B6A4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trav12d-3A0A075B6A4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav12d-3A0A075B6A4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav12d-3A0A075B6A4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12d-3A0A075B6A4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12d-3A0A075B6A4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Gm9939-201ENSMUST00000067161 1154 ntBASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12d-3A0A075B6A4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12d-3A0A075B6A4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12d-3A0A075B6A4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Trav12d-3A0A075B6A4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12d-3A0A075B6A4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12d-3A0A075B6A4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12d-3A0A075B6A4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12d-3A0A075B6A4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav12d-3A0A075B6A4 Gm6821-201ENSMUST00000107540 542 ntBASIC14.48□□□□□ -0.09
Trav12d-3A0A075B6A4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12d-3A0A075B6A4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12d-3A0A075B6A4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12d-3A0A075B6A4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav12d-3A0A075B6A4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav12d-3A0A075B6A4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-3A0A075B6A4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Trav12d-3A0A075B6A4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-3A0A075B6A4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-3A0A075B6A4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-3A0A075B6A4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav12d-3A0A075B6A4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-3A0A075B6A4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-3A0A075B6A4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-3A0A075B6A4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-3A0A075B6A4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-3A0A075B6A4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12d-3A0A075B6A4 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.46□□□□□ -0.1
Trav12d-3A0A075B6A4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12d-3A0A075B6A4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trav12d-3A0A075B6A4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trav12d-3A0A075B6A4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12d-3A0A075B6A4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav12d-3A0A075B6A4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms