Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Golgb1-201ENSMUST00000023534 498 ntBASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-4A0A075B652 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav5-4A0A075B652 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav5-4A0A075B652 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav5-4A0A075B652 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-4A0A075B652 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Trav5-4A0A075B652 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav5-4A0A075B652 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-4A0A075B652 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-4A0A075B652 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav5-4A0A075B652 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-4A0A075B652 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-4A0A075B652 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.08■□□□□ 0.16
Trav5-4A0A075B652 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-4A0A075B652 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-4A0A075B652 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-4A0A075B652 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav5-4A0A075B652 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-4A0A075B652 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav5-4A0A075B652 Gm12922-201ENSMUST00000120626 809 ntBASIC16.07■□□□□ 0.16
Trav5-4A0A075B652 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-4A0A075B652 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-4A0A075B652 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav5-4A0A075B652 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-4A0A075B652 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-4A0A075B652 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav5-4A0A075B652 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-4A0A075B652 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav5-4A0A075B652 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-4A0A075B652 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-4A0A075B652 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav5-4A0A075B652 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-4A0A075B652 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-4A0A075B652 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-4A0A075B652 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav5-4A0A075B652 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-4A0A075B652 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-4A0A075B652 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Trav5-4A0A075B652 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav5-4A0A075B652 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav5-4A0A075B652 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav5-4A0A075B652 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav5-4A0A075B652 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav5-4A0A075B652 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trav5-4A0A075B652 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav5-4A0A075B652 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav5-4A0A075B652 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav5-4A0A075B652 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav5-4A0A075B652 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 AA386476-201ENSMUST00000098781 1665 ntBASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-4A0A075B652 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms