Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-7-dv9A0A075B639 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-7-dv9A0A075B639 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-7-dv9A0A075B639 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trav6-7-dv9A0A075B639 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-7-dv9A0A075B639 Spcs1-204ENSMUST00000226782 949 ntBASIC17.14■□□□□ 0.33
Trav6-7-dv9A0A075B639 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-7-dv9A0A075B639 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-7-dv9A0A075B639 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-7-dv9A0A075B639 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-7-dv9A0A075B639 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-7-dv9A0A075B639 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-7-dv9A0A075B639 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-7-dv9A0A075B639 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav6-7-dv9A0A075B639 Gm43137-201ENSMUST00000198052 594 ntBASIC17.13■□□□□ 0.33
Trav6-7-dv9A0A075B639 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav6-7-dv9A0A075B639 Serp2-204ENSMUST00000228055 705 ntBASIC17.13■□□□□ 0.33
Trav6-7-dv9A0A075B639 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-7-dv9A0A075B639 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-7-dv9A0A075B639 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.13■□□□□ 0.33
Trav6-7-dv9A0A075B639 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-7-dv9A0A075B639 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-7-dv9A0A075B639 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-7-dv9A0A075B639 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-7-dv9A0A075B639 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-7-dv9A0A075B639 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.11■□□□□ 0.33
Trav6-7-dv9A0A075B639 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-7-dv9A0A075B639 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-7-dv9A0A075B639 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-7-dv9A0A075B639 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav6-7-dv9A0A075B639 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.11■□□□□ 0.33
Trav6-7-dv9A0A075B639 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-7-dv9A0A075B639 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-7-dv9A0A075B639 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trav6-7-dv9A0A075B639 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-7-dv9A0A075B639 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trav6-7-dv9A0A075B639 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.08■□□□□ 0.33
Trav6-7-dv9A0A075B639 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Trav6-7-dv9A0A075B639 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6-7-dv9A0A075B639 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trav6-7-dv9A0A075B639 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-7-dv9A0A075B639 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-7-dv9A0A075B639 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-7-dv9A0A075B639 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-7-dv9A0A075B639 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-7-dv9A0A075B639 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trav6-7-dv9A0A075B639 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-7-dv9A0A075B639 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-7-dv9A0A075B639 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-7-dv9A0A075B639 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-7-dv9A0A075B639 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms