Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav16nA0A075B634 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16nA0A075B634 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16nA0A075B634 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav16nA0A075B634 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16nA0A075B634 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16nA0A075B634 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav16nA0A075B634 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav16nA0A075B634 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
Trav16nA0A075B634 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16nA0A075B634 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav16nA0A075B634 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16nA0A075B634 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16nA0A075B634 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16nA0A075B634 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav16nA0A075B634 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16nA0A075B634 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16nA0A075B634 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16nA0A075B634 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16nA0A075B634 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav16nA0A075B634 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav16nA0A075B634 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16nA0A075B634 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav16nA0A075B634 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav16nA0A075B634 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16nA0A075B634 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16nA0A075B634 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16nA0A075B634 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16nA0A075B634 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.6□□□□□ -0.07
Trav16nA0A075B634 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16nA0A075B634 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16nA0A075B634 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16nA0A075B634 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav16nA0A075B634 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trav16nA0A075B634 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16nA0A075B634 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav16nA0A075B634 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16nA0A075B634 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav16nA0A075B634 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16nA0A075B634 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16nA0A075B634 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16nA0A075B634 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16nA0A075B634 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16nA0A075B634 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav16nA0A075B634 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms