Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav6-6A0A075B603 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trav6-6A0A075B603 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-6A0A075B603 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav6-6A0A075B603 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-6A0A075B603 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-6A0A075B603 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav6-6A0A075B603 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-6A0A075B603 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trav6-6A0A075B603 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Gm40881-201ENSMUST00000223397 166 ntBASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-6A0A075B603 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-6A0A075B603 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Gm7143-201ENSMUST00000222811 859 ntBASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-6A0A075B603 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav6-6A0A075B603 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms