Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav9-1A0A075B601 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav9-1A0A075B601 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav9-1A0A075B601 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav9-1A0A075B601 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.08■□□□□ 0.01
Trav9-1A0A075B601 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav9-1A0A075B601 Golph3-205ENSMUST00000228671 2842 ntBASIC15.08■□□□□ 0.01
Trav9-1A0A075B601 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trav9-1A0A075B601 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav9-1A0A075B601 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9-1A0A075B601 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav9-1A0A075B601 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9-1A0A075B601 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9-1A0A075B601 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.08■□□□□ 0
Trav9-1A0A075B601 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.08■□□□□ 0
Trav9-1A0A075B601 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9-1A0A075B601 AA386476-201ENSMUST00000098781 1665 ntBASIC15.08■□□□□ 0
Trav9-1A0A075B601 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9-1A0A075B601 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9-1A0A075B601 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.08■□□□□ 0
Trav9-1A0A075B601 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav9-1A0A075B601 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav9-1A0A075B601 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav9-1A0A075B601 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.07■□□□□ 0
Trav9-1A0A075B601 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.07■□□□□ 0
Trav9-1A0A075B601 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.07■□□□□ 0
Trav9-1A0A075B601 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav9-1A0A075B601 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-1A0A075B601 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-1A0A075B601 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-1A0A075B601 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-1A0A075B601 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-1A0A075B601 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-1A0A075B601 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-1A0A075B601 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-1A0A075B601 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav9-1A0A075B601 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav9-1A0A075B601 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.06■□□□□ 0
Trav9-1A0A075B601 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9-1A0A075B601 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9-1A0A075B601 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9-1A0A075B601 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav9-1A0A075B601 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.06■□□□□ 0
Trav9-1A0A075B601 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav9-1A0A075B601 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav9-1A0A075B601 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9-1A0A075B601 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9-1A0A075B601 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9-1A0A075B601 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav9-1A0A075B601 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav9-1A0A075B601 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav9-1A0A075B601 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9-1A0A075B601 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9-1A0A075B601 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9-1A0A075B601 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9-1A0A075B601 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav9-1A0A075B601 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9-1A0A075B601 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9-1A0A075B601 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9-1A0A075B601 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Trav9-1A0A075B601 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.05■□□□□ -0
Trav9-1A0A075B601 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9-1A0A075B601 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9-1A0A075B601 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav9-1A0A075B601 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9-1A0A075B601 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9-1A0A075B601 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav9-1A0A075B601 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav9-1A0A075B601 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.04■□□□□ -0
Trav9-1A0A075B601 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9-1A0A075B601 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9-1A0A075B601 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Trav9-1A0A075B601 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.03■□□□□ -0
Trav9-1A0A075B601 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.03■□□□□ -0
Trav9-1A0A075B601 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9-1A0A075B601 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9-1A0A075B601 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.03■□□□□ -0
Trav9-1A0A075B601 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav9-1A0A075B601 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9-1A0A075B601 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.03■□□□□ -0
Trav9-1A0A075B601 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav9-1A0A075B601 Golgb1-201ENSMUST00000023534 498 ntBASIC15.03■□□□□ -0
Trav9-1A0A075B601 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9-1A0A075B601 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.03■□□□□ -0
Trav9-1A0A075B601 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9-1A0A075B601 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav9-1A0A075B601 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav9-1A0A075B601 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9-1A0A075B601 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav9-1A0A075B601 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9-1A0A075B601 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9-1A0A075B601 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9-1A0A075B601 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9-1A0A075B601 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9-1A0A075B601 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9-1A0A075B601 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9-1A0A075B601 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
Trav9-1A0A075B601 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9-1A0A075B601 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav9-1A0A075B601 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms